Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Rpap1Q80TE0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Rpap1Q80TE0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Rpap1Q80TE0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC27.83■■■□□ 2.05
Rpap1Q80TE0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Rpap1Q80TE0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Rpap1Q80TE0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC27.83■■■□□ 2.05
Rpap1Q80TE0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Rpap1Q80TE0 Gm17808-201ENSMUST00000200859 894 ntBASIC27.83■■■□□ 2.05
Rpap1Q80TE0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rpap1Q80TE0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC27.82■■■□□ 2.04
Rpap1Q80TE0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rpap1Q80TE0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rpap1Q80TE0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rpap1Q80TE0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rpap1Q80TE0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rpap1Q80TE0 Gm9013-201ENSMUST00000132939 882 ntBASIC27.82■■■□□ 2.04
Rpap1Q80TE0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Rpap1Q80TE0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC27.82■■■□□ 2.04
Rpap1Q80TE0 Mir1668-201ENSMUST00000184114 107 ntBASIC27.82■■■□□ 2.04
Rpap1Q80TE0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rpap1Q80TE0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rpap1Q80TE0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Rpap1Q80TE0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rpap1Q80TE0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Rpap1Q80TE0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rpap1Q80TE0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
Rpap1Q80TE0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Rpap1Q80TE0 Iqck-206ENSMUST00000208658 2891 ntBASIC27.81■■■□□ 2.04
Rpap1Q80TE0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Rpap1Q80TE0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rpap1Q80TE0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rpap1Q80TE0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
Rpap1Q80TE0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Rpap1Q80TE0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC27.8■■■□□ 2.04
Rpap1Q80TE0 Gm27389-201ENSMUST00000183622 195 ntBASIC27.8■■■□□ 2.04
Rpap1Q80TE0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Rpap1Q80TE0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rpap1Q80TE0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rpap1Q80TE0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Rpap1Q80TE0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Rpap1Q80TE0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rpap1Q80TE0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rpap1Q80TE0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Rpap1Q80TE0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Rpap1Q80TE0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC27.79■■■□□ 2.04
Rpap1Q80TE0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC27.79■■■□□ 2.04
Rpap1Q80TE0 Il3ra-202ENSMUST00000223589 738 ntBASIC27.79■■■□□ 2.04
Rpap1Q80TE0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Rpap1Q80TE0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC27.79■■■□□ 2.04
Rpap1Q80TE0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Rpap1Q80TE0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Rpap1Q80TE0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
Rpap1Q80TE0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rpap1Q80TE0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
Rpap1Q80TE0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Rpap1Q80TE0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Rpap1Q80TE0 Gm29791-202ENSMUST00000207888 369 ntBASIC27.78■■■□□ 2.04
Rpap1Q80TE0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC27.78■■■□□ 2.04
Rpap1Q80TE0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
Rpap1Q80TE0 Spsb2-203ENSMUST00000112473 1322 ntBASIC27.78■■■□□ 2.04
Rpap1Q80TE0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Rpap1Q80TE0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC27.77■■■□□ 2.04
Rpap1Q80TE0 Gm18669-201ENSMUST00000216049 778 ntBASIC27.77■■■□□ 2.04
Rpap1Q80TE0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Rpap1Q80TE0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Rpap1Q80TE0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
Rpap1Q80TE0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
Rpap1Q80TE0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Rpap1Q80TE0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
Rpap1Q80TE0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC27.77■■■□□ 2.04
Rpap1Q80TE0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Rpap1Q80TE0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rpap1Q80TE0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
Rpap1Q80TE0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rpap1Q80TE0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Rpap1Q80TE0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
Rpap1Q80TE0 AC133598.3-202ENSMUST00000224219 531 ntBASIC27.75■■■□□ 2.03
Rpap1Q80TE0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Rpap1Q80TE0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Rpap1Q80TE0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
Rpap1Q80TE0 Gm7153-201ENSMUST00000117092 455 ntBASIC27.75■■■□□ 2.03
Rpap1Q80TE0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
Rpap1Q80TE0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Rpap1Q80TE0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
Rpap1Q80TE0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
Rpap1Q80TE0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Rpap1Q80TE0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Rpap1Q80TE0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Rpap1Q80TE0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
Rpap1Q80TE0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
Rpap1Q80TE0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Rpap1Q80TE0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC27.74■■■□□ 2.03
Rpap1Q80TE0 Gm9731-201ENSMUST00000209480 747 ntBASIC27.74■■■□□ 2.03
Rpap1Q80TE0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC27.74■■■□□ 2.03
Rpap1Q80TE0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Rpap1Q80TE0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Rpap1Q80TE0 Gm43545-201ENSMUST00000196765 2779 ntBASIC27.74■■■□□ 2.03
Rpap1Q80TE0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Rpap1Q80TE0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms