Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38bQ80SY5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38bQ80SY5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.63■□□□□ 0.57
Prpf38bQ80SY5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.63■□□□□ 0.57
Prpf38bQ80SY5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.63■□□□□ 0.57
Prpf38bQ80SY5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38bQ80SY5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38bQ80SY5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Prpf38bQ80SY5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Prpf38bQ80SY5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38bQ80SY5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Prpf38bQ80SY5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38bQ80SY5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38bQ80SY5 Fst-202ENSMUST00000223640 2612 ntBASIC18.62■□□□□ 0.57
Prpf38bQ80SY5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38bQ80SY5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38bQ80SY5 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.62■□□□□ 0.57
Prpf38bQ80SY5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.62■□□□□ 0.57
Prpf38bQ80SY5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38bQ80SY5 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Prpf38bQ80SY5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38bQ80SY5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38bQ80SY5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38bQ80SY5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38bQ80SY5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Prpf38bQ80SY5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38bQ80SY5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.61■□□□□ 0.57
Prpf38bQ80SY5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38bQ80SY5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38bQ80SY5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38bQ80SY5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38bQ80SY5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Prpf38bQ80SY5 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.61■□□□□ 0.57
Prpf38bQ80SY5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38bQ80SY5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38bQ80SY5 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.61■□□□□ 0.57
Prpf38bQ80SY5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Prpf38bQ80SY5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38bQ80SY5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38bQ80SY5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf38bQ80SY5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf38bQ80SY5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf38bQ80SY5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Prpf38bQ80SY5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf38bQ80SY5 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.6■□□□□ 0.57
Prpf38bQ80SY5 Gm23634-201ENSMUST00000175071 91 ntBASIC18.6■□□□□ 0.57
Prpf38bQ80SY5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf38bQ80SY5 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Prpf38bQ80SY5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf38bQ80SY5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf38bQ80SY5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf38bQ80SY5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38bQ80SY5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.59■□□□□ 0.57
Prpf38bQ80SY5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38bQ80SY5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Prpf38bQ80SY5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38bQ80SY5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Prpf38bQ80SY5 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.59■□□□□ 0.57
Prpf38bQ80SY5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38bQ80SY5 Gm25925-201ENSMUST00000158314 306 ntBASIC18.59■□□□□ 0.57
Prpf38bQ80SY5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Prpf38bQ80SY5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38bQ80SY5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38bQ80SY5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.59■□□□□ 0.57
Prpf38bQ80SY5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.59■□□□□ 0.57
Prpf38bQ80SY5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38bQ80SY5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38bQ80SY5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38bQ80SY5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.59■□□□□ 0.57
Prpf38bQ80SY5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prpf38bQ80SY5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Prpf38bQ80SY5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Prpf38bQ80SY5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prpf38bQ80SY5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Prpf38bQ80SY5 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.57■□□□□ 0.56
Prpf38bQ80SY5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Prpf38bQ80SY5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38bQ80SY5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38bQ80SY5 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38bQ80SY5 Odf3b-204ENSMUST00000227834 930 ntBASIC18.57■□□□□ 0.56
Prpf38bQ80SY5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38bQ80SY5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms