Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Kdm1aQ6ZQ88 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Kdm1aQ6ZQ88 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.78■□□□□ 0.76
Kdm1aQ6ZQ88 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Kdm1aQ6ZQ88 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Kdm1aQ6ZQ88 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Kdm1aQ6ZQ88 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Kdm1aQ6ZQ88 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Kdm1aQ6ZQ88 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Kdm1aQ6ZQ88 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Kdm1aQ6ZQ88 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Kdm1aQ6ZQ88 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.77■□□□□ 0.76
Kdm1aQ6ZQ88 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Kdm1aQ6ZQ88 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Kdm1aQ6ZQ88 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Kdm1aQ6ZQ88 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.77■□□□□ 0.75
Kdm1aQ6ZQ88 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Kdm1aQ6ZQ88 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Kdm1aQ6ZQ88 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Kdm1aQ6ZQ88 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Kdm1aQ6ZQ88 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Kdm1aQ6ZQ88 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.76■□□□□ 0.75
Kdm1aQ6ZQ88 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Kdm1aQ6ZQ88 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.76■□□□□ 0.75
Kdm1aQ6ZQ88 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.76■□□□□ 0.75
Kdm1aQ6ZQ88 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Kdm1aQ6ZQ88 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Kdm1aQ6ZQ88 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Kdm1aQ6ZQ88 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Kdm1aQ6ZQ88 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kdm1aQ6ZQ88 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Kdm1aQ6ZQ88 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kdm1aQ6ZQ88 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kdm1aQ6ZQ88 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kdm1aQ6ZQ88 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.75■□□□□ 0.75
Kdm1aQ6ZQ88 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Kdm1aQ6ZQ88 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kdm1aQ6ZQ88 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kdm1aQ6ZQ88 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kdm1aQ6ZQ88 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kdm1aQ6ZQ88 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.75■□□□□ 0.75
Kdm1aQ6ZQ88 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.75■□□□□ 0.75
Kdm1aQ6ZQ88 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kdm1aQ6ZQ88 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Kdm1aQ6ZQ88 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kdm1aQ6ZQ88 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Kdm1aQ6ZQ88 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.73■□□□□ 0.75
Kdm1aQ6ZQ88 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Kdm1aQ6ZQ88 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Kdm1aQ6ZQ88 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Kdm1aQ6ZQ88 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Kdm1aQ6ZQ88 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Kdm1aQ6ZQ88 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Kdm1aQ6ZQ88 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Kdm1aQ6ZQ88 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Kdm1aQ6ZQ88 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Kdm1aQ6ZQ88 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.73■□□□□ 0.75
Kdm1aQ6ZQ88 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Kdm1aQ6ZQ88 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Kdm1aQ6ZQ88 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Kdm1aQ6ZQ88 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Kdm1aQ6ZQ88 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.72■□□□□ 0.75
Kdm1aQ6ZQ88 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Kdm1aQ6ZQ88 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Kdm1aQ6ZQ88 Gm13148-201ENSMUST00000118892 745 ntBASIC19.72■□□□□ 0.75
Kdm1aQ6ZQ88 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.72■□□□□ 0.75
Kdm1aQ6ZQ88 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Kdm1aQ6ZQ88 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Kdm1aQ6ZQ88 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.72■□□□□ 0.75
Kdm1aQ6ZQ88 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Kdm1aQ6ZQ88 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Kdm1aQ6ZQ88 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Kdm1aQ6ZQ88 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Kdm1aQ6ZQ88 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Kdm1aQ6ZQ88 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Kdm1aQ6ZQ88 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Kdm1aQ6ZQ88 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kdm1aQ6ZQ88 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Kdm1aQ6ZQ88 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kdm1aQ6ZQ88 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kdm1aQ6ZQ88 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kdm1aQ6ZQ88 Gm2399-201ENSMUST00000104944 225 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms