Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx55Q6ZPL9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx55Q6ZPL9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.43■□□□□ 0.86
Ddx55Q6ZPL9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx55Q6ZPL9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx55Q6ZPL9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx55Q6ZPL9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.43■□□□□ 0.86
Ddx55Q6ZPL9 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.43■□□□□ 0.86
Ddx55Q6ZPL9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx55Q6ZPL9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ddx55Q6ZPL9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ddx55Q6ZPL9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx55Q6ZPL9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.43■□□□□ 0.86
Ddx55Q6ZPL9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx55Q6ZPL9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx55Q6ZPL9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx55Q6ZPL9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.42■□□□□ 0.86
Ddx55Q6ZPL9 Gm5587-201ENSMUST00000206270 674 ntBASIC20.42■□□□□ 0.86
Ddx55Q6ZPL9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx55Q6ZPL9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx55Q6ZPL9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx55Q6ZPL9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx55Q6ZPL9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx55Q6ZPL9 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 Gm13401-201ENSMUST00000117074 291 ntBASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 Gm27704-201ENSMUST00000185094 107 ntBASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx55Q6ZPL9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx55Q6ZPL9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx55Q6ZPL9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.4■□□□□ 0.86
Ddx55Q6ZPL9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx55Q6ZPL9 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.4■□□□□ 0.86
Ddx55Q6ZPL9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx55Q6ZPL9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx55Q6ZPL9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx55Q6ZPL9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx55Q6ZPL9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx55Q6ZPL9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx55Q6ZPL9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx55Q6ZPL9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx55Q6ZPL9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.39■□□□□ 0.85
Ddx55Q6ZPL9 Gm27389-201ENSMUST00000183622 195 ntBASIC20.39■□□□□ 0.85
Ddx55Q6ZPL9 Mir1668-201ENSMUST00000184114 107 ntBASIC20.39■□□□□ 0.85
Ddx55Q6ZPL9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx55Q6ZPL9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx55Q6ZPL9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx55Q6ZPL9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Ddx55Q6ZPL9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.39■□□□□ 0.85
Ddx55Q6ZPL9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx55Q6ZPL9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx55Q6ZPL9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ddx55Q6ZPL9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx55Q6ZPL9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx55Q6ZPL9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx55Q6ZPL9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ddx55Q6ZPL9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx55Q6ZPL9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx55Q6ZPL9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.38■□□□□ 0.85
Ddx55Q6ZPL9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx55Q6ZPL9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx55Q6ZPL9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx55Q6ZPL9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ddx55Q6ZPL9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx55Q6ZPL9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx55Q6ZPL9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx55Q6ZPL9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx55Q6ZPL9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx55Q6ZPL9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.37■□□□□ 0.85
Ddx55Q6ZPL9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ddx55Q6ZPL9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx55Q6ZPL9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx55Q6ZPL9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Ddx55Q6ZPL9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ddx55Q6ZPL9 Gm9013-201ENSMUST00000132939 882 ntBASIC20.37■□□□□ 0.85
Ddx55Q6ZPL9 Gm29518-201ENSMUST00000190858 372 ntBASIC20.37■□□□□ 0.85
Ddx55Q6ZPL9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.37■□□□□ 0.85
Ddx55Q6ZPL9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ddx55Q6ZPL9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Ddx55Q6ZPL9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.37■□□□□ 0.85
Ddx55Q6ZPL9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx55Q6ZPL9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx55Q6ZPL9 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.36■□□□□ 0.85
Ddx55Q6ZPL9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx55Q6ZPL9 Gm10418-201ENSMUST00000100943 576 ntBASIC20.36■□□□□ 0.85
Ddx55Q6ZPL9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms