Protein–RNA interactions for Protein: Q6XAS4

Ssxb3, SSXB3 protein, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxb3Q6XAS4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ssxb3Q6XAS4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ssxb3Q6XAS4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ssxb3Q6XAS4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ssxb3Q6XAS4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ssxb3Q6XAS4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ssxb3Q6XAS4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.72■□□□□ 0.43
Ssxb3Q6XAS4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ssxb3Q6XAS4 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.72■□□□□ 0.43
Ssxb3Q6XAS4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ssxb3Q6XAS4 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.72■□□□□ 0.43
Ssxb3Q6XAS4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ssxb3Q6XAS4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ssxb3Q6XAS4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ssxb3Q6XAS4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ssxb3Q6XAS4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ssxb3Q6XAS4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ssxb3Q6XAS4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.71■□□□□ 0.43
Ssxb3Q6XAS4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.71■□□□□ 0.43
Ssxb3Q6XAS4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ssxb3Q6XAS4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ssxb3Q6XAS4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ssxb3Q6XAS4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ssxb3Q6XAS4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ssxb3Q6XAS4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.7■□□□□ 0.42
Ssxb3Q6XAS4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ssxb3Q6XAS4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ssxb3Q6XAS4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Ssxb3Q6XAS4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssxb3Q6XAS4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ssxb3Q6XAS4 Gm6211-202ENSMUST00000167849 925 ntBASIC17.7■□□□□ 0.42
Ssxb3Q6XAS4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.7■□□□□ 0.42
Ssxb3Q6XAS4 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.7■□□□□ 0.42
Ssxb3Q6XAS4 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.7■□□□□ 0.42
Ssxb3Q6XAS4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ssxb3Q6XAS4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ssxb3Q6XAS4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.7■□□□□ 0.42
Ssxb3Q6XAS4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssxb3Q6XAS4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.7■□□□□ 0.42
Ssxb3Q6XAS4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.69■□□□□ 0.42
Ssxb3Q6XAS4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssxb3Q6XAS4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssxb3Q6XAS4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssxb3Q6XAS4 Gm7290-201ENSMUST00000104990 617 ntBASIC17.69■□□□□ 0.42
Ssxb3Q6XAS4 Gm12918-201ENSMUST00000120234 636 ntBASIC17.69■□□□□ 0.42
Ssxb3Q6XAS4 Gm15710-201ENSMUST00000121821 636 ntBASIC17.69■□□□□ 0.42
Ssxb3Q6XAS4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.69■□□□□ 0.42
Ssxb3Q6XAS4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ssxb3Q6XAS4 Gm5075-201ENSMUST00000196916 622 ntBASIC17.69■□□□□ 0.42
Ssxb3Q6XAS4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.69■□□□□ 0.42
Ssxb3Q6XAS4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.69■□□□□ 0.42
Ssxb3Q6XAS4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssxb3Q6XAS4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssxb3Q6XAS4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssxb3Q6XAS4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssxb3Q6XAS4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssxb3Q6XAS4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ssxb3Q6XAS4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Gm8495-201ENSMUST00000188740 694 ntBASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssxb3Q6XAS4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Ssxb3Q6XAS4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ssxb3Q6XAS4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssxb3Q6XAS4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms