Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.75■□□□□ 0.91
Slc44a1Q6X893 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc44a1Q6X893 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc44a1Q6X893 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc44a1Q6X893 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc44a1Q6X893 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Slc44a1Q6X893 Gm37292-201ENSMUST00000192062 758 ntBASIC20.75■□□□□ 0.91
Slc44a1Q6X893 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.75■□□□□ 0.91
Slc44a1Q6X893 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc44a1Q6X893 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc44a1Q6X893 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc44a1Q6X893 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc44a1Q6X893 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc44a1Q6X893 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Slc44a1Q6X893 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc44a1Q6X893 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc44a1Q6X893 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc44a1Q6X893 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc44a1Q6X893 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Slc44a1Q6X893 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc44a1Q6X893 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc44a1Q6X893 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc44a1Q6X893 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc44a1Q6X893 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc44a1Q6X893 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc44a1Q6X893 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Slc44a1Q6X893 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Slc44a1Q6X893 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc44a1Q6X893 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slc44a1Q6X893 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slc44a1Q6X893 Gm43183-201ENSMUST00000200632 547 ntBASIC20.73■□□□□ 0.91
Slc44a1Q6X893 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Slc44a1Q6X893 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc44a1Q6X893 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.73■□□□□ 0.91
Slc44a1Q6X893 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc44a1Q6X893 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.73■□□□□ 0.91
Slc44a1Q6X893 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Slc44a1Q6X893 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc44a1Q6X893 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slc44a1Q6X893 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.73■□□□□ 0.91
Slc44a1Q6X893 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc44a1Q6X893 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Slc44a1Q6X893 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.72■□□□□ 0.91
Slc44a1Q6X893 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Slc44a1Q6X893 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.72■□□□□ 0.91
Slc44a1Q6X893 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Slc44a1Q6X893 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc44a1Q6X893 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc44a1Q6X893 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc44a1Q6X893 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc44a1Q6X893 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc44a1Q6X893 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc44a1Q6X893 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc44a1Q6X893 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.71■□□□□ 0.91
Slc44a1Q6X893 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Slc44a1Q6X893 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Slc44a1Q6X893 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc44a1Q6X893 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc44a1Q6X893 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc44a1Q6X893 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc44a1Q6X893 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Slc44a1Q6X893 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.7■□□□□ 0.91
Slc44a1Q6X893 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc44a1Q6X893 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc44a1Q6X893 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.7■□□□□ 0.9
Slc44a1Q6X893 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc44a1Q6X893 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc44a1Q6X893 Gm13401-201ENSMUST00000117074 291 ntBASIC20.7■□□□□ 0.9
Slc44a1Q6X893 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Slc44a1Q6X893 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc44a1Q6X893 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc44a1Q6X893 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc44a1Q6X893 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc44a1Q6X893 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc44a1Q6X893 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Slc44a1Q6X893 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc44a1Q6X893 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc44a1Q6X893 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slc44a1Q6X893 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc44a1Q6X893 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc44a1Q6X893 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc44a1Q6X893 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slc44a1Q6X893 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc44a1Q6X893 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.69■□□□□ 0.9
Slc44a1Q6X893 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc44a1Q6X893 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc44a1Q6X893 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.69■□□□□ 0.9
Slc44a1Q6X893 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc44a1Q6X893 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc44a1Q6X893 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc44a1Q6X893 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Slc44a1Q6X893 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slc44a1Q6X893 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc44a1Q6X893 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc44a1Q6X893 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Slc44a1Q6X893 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.68■□□□□ 0.9
Slc44a1Q6X893 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.68■□□□□ 0.9
Slc44a1Q6X893 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc44a1Q6X893 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Slc44a1Q6X893 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms