Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Scn10aQ6QIY3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Scn10aQ6QIY3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Scn10aQ6QIY3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn10aQ6QIY3 Gm11355-201ENSMUST00000121120 306 ntBASIC20.38■□□□□ 0.85
Scn10aQ6QIY3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.38■□□□□ 0.85
Scn10aQ6QIY3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.38■□□□□ 0.85
Scn10aQ6QIY3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn10aQ6QIY3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn10aQ6QIY3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn10aQ6QIY3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn10aQ6QIY3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn10aQ6QIY3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scn10aQ6QIY3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn10aQ6QIY3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn10aQ6QIY3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scn10aQ6QIY3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scn10aQ6QIY3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn10aQ6QIY3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.37■□□□□ 0.85
Scn10aQ6QIY3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn10aQ6QIY3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Scn10aQ6QIY3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn10aQ6QIY3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Scn10aQ6QIY3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Scn10aQ6QIY3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.37■□□□□ 0.85
Scn10aQ6QIY3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Scn10aQ6QIY3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn10aQ6QIY3 Gm44771-201ENSMUST00000206975 626 ntBASIC20.37■□□□□ 0.85
Scn10aQ6QIY3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn10aQ6QIY3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn10aQ6QIY3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn10aQ6QIY3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn10aQ6QIY3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn10aQ6QIY3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn10aQ6QIY3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.36■□□□□ 0.85
Scn10aQ6QIY3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn10aQ6QIY3 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.36■□□□□ 0.85
Scn10aQ6QIY3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn10aQ6QIY3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn10aQ6QIY3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn10aQ6QIY3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn10aQ6QIY3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn10aQ6QIY3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn10aQ6QIY3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn10aQ6QIY3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.34■□□□□ 0.85
Scn10aQ6QIY3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Scn10aQ6QIY3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn10aQ6QIY3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn10aQ6QIY3 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.34■□□□□ 0.85
Scn10aQ6QIY3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.34■□□□□ 0.85
Scn10aQ6QIY3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Scn10aQ6QIY3 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.34■□□□□ 0.85
Scn10aQ6QIY3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scn10aQ6QIY3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scn10aQ6QIY3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scn10aQ6QIY3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scn10aQ6QIY3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scn10aQ6QIY3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Scn10aQ6QIY3 Gm37722-201ENSMUST00000193757 208 ntBASIC20.33■□□□□ 0.84
Scn10aQ6QIY3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scn10aQ6QIY3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scn10aQ6QIY3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scn10aQ6QIY3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scn10aQ6QIY3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Scn10aQ6QIY3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Scn10aQ6QIY3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.32■□□□□ 0.84
Scn10aQ6QIY3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Scn10aQ6QIY3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Scn10aQ6QIY3 Actl10-202ENSMUST00000226583 1501 ntBASIC20.32■□□□□ 0.84
Scn10aQ6QIY3 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.32■□□□□ 0.84
Scn10aQ6QIY3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Scn10aQ6QIY3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn10aQ6QIY3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn10aQ6QIY3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn10aQ6QIY3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Scn10aQ6QIY3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn10aQ6QIY3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Scn10aQ6QIY3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms