Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Snrnp40Q6PE01 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Snrnp40Q6PE01 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Snrnp40Q6PE01 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Snrnp40Q6PE01 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.74■□□□□ 0.11
Snrnp40Q6PE01 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Snrnp40Q6PE01 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Snrnp40Q6PE01 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.74■□□□□ 0.11
Snrnp40Q6PE01 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Snrnp40Q6PE01 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Snrnp40Q6PE01 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Snrnp40Q6PE01 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Snrnp40Q6PE01 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.74■□□□□ 0.11
Snrnp40Q6PE01 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Snrnp40Q6PE01 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Snrnp40Q6PE01 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Snrnp40Q6PE01 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Snrnp40Q6PE01 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Snrnp40Q6PE01 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Snrnp40Q6PE01 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Snrnp40Q6PE01 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Snrnp40Q6PE01 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Snrnp40Q6PE01 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Snrnp40Q6PE01 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.73■□□□□ 0.11
Snrnp40Q6PE01 Gm13474-201ENSMUST00000122466 815 ntBASIC15.73■□□□□ 0.11
Snrnp40Q6PE01 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Snrnp40Q6PE01 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Snrnp40Q6PE01 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Snrnp40Q6PE01 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Snrnp40Q6PE01 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Snrnp40Q6PE01 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Snrnp40Q6PE01 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.73■□□□□ 0.11
Snrnp40Q6PE01 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Snrnp40Q6PE01 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Snrnp40Q6PE01 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.72■□□□□ 0.11
Snrnp40Q6PE01 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Snrnp40Q6PE01 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Snrnp40Q6PE01 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Snrnp40Q6PE01 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.72■□□□□ 0.11
Snrnp40Q6PE01 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Snrnp40Q6PE01 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Snrnp40Q6PE01 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Snrnp40Q6PE01 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Snrnp40Q6PE01 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Snrnp40Q6PE01 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Snrnp40Q6PE01 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Snrnp40Q6PE01 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Snrnp40Q6PE01 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.72■□□□□ 0.11
Snrnp40Q6PE01 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Snrnp40Q6PE01 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Snrnp40Q6PE01 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Snrnp40Q6PE01 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Snrnp40Q6PE01 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Snrnp40Q6PE01 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.71■□□□□ 0.11
Snrnp40Q6PE01 Gm7638-201ENSMUST00000121348 967 ntBASIC15.71■□□□□ 0.11
Snrnp40Q6PE01 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.71■□□□□ 0.11
Snrnp40Q6PE01 Gm27704-201ENSMUST00000185094 107 ntBASIC15.71■□□□□ 0.11
Snrnp40Q6PE01 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.71■□□□□ 0.11
Snrnp40Q6PE01 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.71■□□□□ 0.11
Snrnp40Q6PE01 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Snrnp40Q6PE01 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Snrnp40Q6PE01 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Snrnp40Q6PE01 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Snrnp40Q6PE01 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.71■□□□□ 0.1
Snrnp40Q6PE01 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Snrnp40Q6PE01 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Gm27389-201ENSMUST00000183622 195 ntBASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Gm17971-201ENSMUST00000190239 806 ntBASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Gm7791-201ENSMUST00000219066 539 ntBASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Gm21559-201ENSMUST00000220638 855 ntBASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Gm8587-201ENSMUST00000076538 843 ntBASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Snrnp40Q6PE01 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms