Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf6Q6NVF9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.34■□□□□ 0.37
Cpsf6Q6NVF9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf6Q6NVF9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf6Q6NVF9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf6Q6NVF9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cpsf6Q6NVF9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpsf6Q6NVF9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpsf6Q6NVF9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpsf6Q6NVF9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.33■□□□□ 0.36
Cpsf6Q6NVF9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cpsf6Q6NVF9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.33■□□□□ 0.36
Cpsf6Q6NVF9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpsf6Q6NVF9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpsf6Q6NVF9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cpsf6Q6NVF9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpsf6Q6NVF9 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.33■□□□□ 0.36
Cpsf6Q6NVF9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Cpsf6Q6NVF9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Cpsf6Q6NVF9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpsf6Q6NVF9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpsf6Q6NVF9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.32■□□□□ 0.36
Cpsf6Q6NVF9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.32■□□□□ 0.36
Cpsf6Q6NVF9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Cpsf6Q6NVF9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpsf6Q6NVF9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpsf6Q6NVF9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.32■□□□□ 0.36
Cpsf6Q6NVF9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpsf6Q6NVF9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cpsf6Q6NVF9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cpsf6Q6NVF9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cpsf6Q6NVF9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpsf6Q6NVF9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpsf6Q6NVF9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf6Q6NVF9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.31■□□□□ 0.36
Cpsf6Q6NVF9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf6Q6NVF9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf6Q6NVF9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.31■□□□□ 0.36
Cpsf6Q6NVF9 Gm15039-201ENSMUST00000118914 875 ntBASIC17.31■□□□□ 0.36
Cpsf6Q6NVF9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf6Q6NVF9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf6Q6NVF9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf6Q6NVF9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf6Q6NVF9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf6Q6NVF9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cpsf6Q6NVF9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf6Q6NVF9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.31■□□□□ 0.36
Cpsf6Q6NVF9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpsf6Q6NVF9 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.31■□□□□ 0.36
Cpsf6Q6NVF9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cpsf6Q6NVF9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpsf6Q6NVF9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpsf6Q6NVF9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cpsf6Q6NVF9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Cpsf6Q6NVF9 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.3■□□□□ 0.36
Cpsf6Q6NVF9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Cpsf6Q6NVF9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cpsf6Q6NVF9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cpsf6Q6NVF9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.3■□□□□ 0.36
Cpsf6Q6NVF9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cpsf6Q6NVF9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpsf6Q6NVF9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cpsf6Q6NVF9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpsf6Q6NVF9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpsf6Q6NVF9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cpsf6Q6NVF9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf6Q6NVF9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.29■□□□□ 0.36
Cpsf6Q6NVF9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf6Q6NVF9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf6Q6NVF9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf6Q6NVF9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf6Q6NVF9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.29■□□□□ 0.36
Cpsf6Q6NVF9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Cpsf6Q6NVF9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.29■□□□□ 0.36
Cpsf6Q6NVF9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf6Q6NVF9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cpsf6Q6NVF9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf6Q6NVF9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Cpsf6Q6NVF9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf6Q6NVF9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf6Q6NVF9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf6Q6NVF9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf6Q6NVF9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf6Q6NVF9 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.28■□□□□ 0.36
Cpsf6Q6NVF9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cpsf6Q6NVF9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf6Q6NVF9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf6Q6NVF9 Mir5133-201ENSMUST00000174955 77 ntBASIC17.28■□□□□ 0.36
Cpsf6Q6NVF9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf6Q6NVF9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.28■□□□□ 0.36
Cpsf6Q6NVF9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf6Q6NVF9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf6Q6NVF9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf6Q6NVF9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf6Q6NVF9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf6Q6NVF9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf6Q6NVF9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf6Q6NVF9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Cpsf6Q6NVF9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf6Q6NVF9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms