Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg2Q6NS82 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg2Q6NS82 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg2Q6NS82 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg2Q6NS82 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg2Q6NS82 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg2Q6NS82 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg2Q6NS82 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg2Q6NS82 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Retreg2Q6NS82 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg2Q6NS82 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg2Q6NS82 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg2Q6NS82 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg2Q6NS82 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg2Q6NS82 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg2Q6NS82 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg2Q6NS82 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg2Q6NS82 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg2Q6NS82 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.23■□□□□ 0.67
Retreg2Q6NS82 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Retreg2Q6NS82 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg2Q6NS82 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.22■□□□□ 0.67
Retreg2Q6NS82 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg2Q6NS82 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg2Q6NS82 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.22■□□□□ 0.67
Retreg2Q6NS82 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.22■□□□□ 0.67
Retreg2Q6NS82 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Retreg2Q6NS82 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Retreg2Q6NS82 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg2Q6NS82 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg2Q6NS82 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg2Q6NS82 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Retreg2Q6NS82 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg2Q6NS82 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg2Q6NS82 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg2Q6NS82 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
Retreg2Q6NS82 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.21■□□□□ 0.67
Retreg2Q6NS82 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.21■□□□□ 0.67
Retreg2Q6NS82 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg2Q6NS82 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg2Q6NS82 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg2Q6NS82 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Retreg2Q6NS82 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg2Q6NS82 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg2Q6NS82 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg2Q6NS82 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg2Q6NS82 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Retreg2Q6NS82 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg2Q6NS82 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg2Q6NS82 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg2Q6NS82 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Retreg2Q6NS82 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg2Q6NS82 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg2Q6NS82 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Retreg2Q6NS82 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.2■□□□□ 0.66
Retreg2Q6NS82 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg2Q6NS82 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg2Q6NS82 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg2Q6NS82 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Retreg2Q6NS82 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg2Q6NS82 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.2■□□□□ 0.66
Retreg2Q6NS82 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg2Q6NS82 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.2■□□□□ 0.66
Retreg2Q6NS82 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Retreg2Q6NS82 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg2Q6NS82 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg2Q6NS82 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg2Q6NS82 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg2Q6NS82 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg2Q6NS82 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.19■□□□□ 0.66
Retreg2Q6NS82 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.19■□□□□ 0.66
Retreg2Q6NS82 Gm2559-201ENSMUST00000201323 363 ntBASIC19.19■□□□□ 0.66
Retreg2Q6NS82 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg2Q6NS82 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg2Q6NS82 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Retreg2Q6NS82 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg2Q6NS82 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Retreg2Q6NS82 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg2Q6NS82 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg2Q6NS82 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Retreg2Q6NS82 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg2Q6NS82 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Retreg2Q6NS82 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg2Q6NS82 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg2Q6NS82 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Retreg2Q6NS82 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg2Q6NS82 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.18■□□□□ 0.66
Retreg2Q6NS82 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.18■□□□□ 0.66
Retreg2Q6NS82 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg2Q6NS82 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.18■□□□□ 0.66
Retreg2Q6NS82 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg2Q6NS82 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg2Q6NS82 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg2Q6NS82 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg2Q6NS82 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg2Q6NS82 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg2Q6NS82 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.18■□□□□ 0.66
Retreg2Q6NS82 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg2Q6NS82 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg2Q6NS82 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms