Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga7Q6DD96 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga7Q6DD96 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga7Q6DD96 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga7Q6DD96 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga7Q6DD96 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga7Q6DD96 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdhga7Q6DD96 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga7Q6DD96 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.32■□□□□ 0.36
Pcdhga7Q6DD96 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.32■□□□□ 0.36
Pcdhga7Q6DD96 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga7Q6DD96 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga7Q6DD96 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga7Q6DD96 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga7Q6DD96 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.32■□□□□ 0.36
Pcdhga7Q6DD96 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhga7Q6DD96 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga7Q6DD96 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga7Q6DD96 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga7Q6DD96 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Pcdhga7Q6DD96 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga7Q6DD96 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga7Q6DD96 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga7Q6DD96 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdhga7Q6DD96 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.31■□□□□ 0.36
Pcdhga7Q6DD96 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga7Q6DD96 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga7Q6DD96 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga7Q6DD96 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga7Q6DD96 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga7Q6DD96 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga7Q6DD96 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga7Q6DD96 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhga7Q6DD96 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhga7Q6DD96 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhga7Q6DD96 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga7Q6DD96 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga7Q6DD96 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga7Q6DD96 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga7Q6DD96 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.29■□□□□ 0.36
Pcdhga7Q6DD96 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga7Q6DD96 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhga7Q6DD96 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.29■□□□□ 0.36
Pcdhga7Q6DD96 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhga7Q6DD96 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga7Q6DD96 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.29■□□□□ 0.36
Pcdhga7Q6DD96 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Pcdhga7Q6DD96 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga7Q6DD96 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga7Q6DD96 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga7Q6DD96 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
Pcdhga7Q6DD96 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.28■□□□□ 0.36
Pcdhga7Q6DD96 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhga7Q6DD96 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga7Q6DD96 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhga7Q6DD96 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga7Q6DD96 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga7Q6DD96 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcdhga7Q6DD96 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga7Q6DD96 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga7Q6DD96 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga7Q6DD96 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhga7Q6DD96 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga7Q6DD96 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhga7Q6DD96 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga7Q6DD96 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Pcdhga7Q6DD96 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga7Q6DD96 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga7Q6DD96 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhga7Q6DD96 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdhga7Q6DD96 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhga7Q6DD96 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhga7Q6DD96 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.27■□□□□ 0.35
Pcdhga7Q6DD96 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhga7Q6DD96 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhga7Q6DD96 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhga7Q6DD96 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhga7Q6DD96 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhga7Q6DD96 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga7Q6DD96 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga7Q6DD96 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms