Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Mir2861-201ENSMUST00000175539 82 ntBASIC19.09■□□□□ 0.65
Six2Q62232 Gm8969-201ENSMUST00000199694 526 ntBASIC19.09■□□□□ 0.65
Six2Q62232 Mtag2-201ENSMUST00000058665 714 ntBASIC19.09■□□□□ 0.65
Six2Q62232 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six2Q62232 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six2Q62232 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six2Q62232 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six2Q62232 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Six2Q62232 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Six2Q62232 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Six2Q62232 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Six2Q62232 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Six2Q62232 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Six2Q62232 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.08■□□□□ 0.64
Six2Q62232 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six2Q62232 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.08■□□□□ 0.64
Six2Q62232 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six2Q62232 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Six2Q62232 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six2Q62232 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Six2Q62232 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six2Q62232 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six2Q62232 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six2Q62232 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six2Q62232 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six2Q62232 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six2Q62232 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six2Q62232 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six2Q62232 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six2Q62232 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six2Q62232 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six2Q62232 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.07■□□□□ 0.64
Six2Q62232 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Six2Q62232 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.07■□□□□ 0.64
Six2Q62232 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.07■□□□□ 0.64
Six2Q62232 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six2Q62232 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.07■□□□□ 0.64
Six2Q62232 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six2Q62232 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six2Q62232 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six2Q62232 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six2Q62232 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six2Q62232 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.06■□□□□ 0.64
Six2Q62232 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six2Q62232 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Six2Q62232 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Six2Q62232 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.06■□□□□ 0.64
Six2Q62232 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six2Q62232 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Six2Q62232 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six2Q62232 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six2Q62232 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.06■□□□□ 0.64
Six2Q62232 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.06■□□□□ 0.64
Six2Q62232 Gm4968-201ENSMUST00000071458 858 ntBASIC19.06■□□□□ 0.64
Six2Q62232 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six2Q62232 Dio3-201ENSMUST00000097228 1449 ntBASIC19.06■□□□□ 0.64
Six2Q62232 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Six2Q62232 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six2Q62232 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Six2Q62232 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Six2Q62232 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Six2Q62232 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Six2Q62232 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Six2Q62232 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six2Q62232 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six2Q62232 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.05■□□□□ 0.64
Six2Q62232 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.05■□□□□ 0.64
Six2Q62232 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.05■□□□□ 0.64
Six2Q62232 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six2Q62232 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.05■□□□□ 0.64
Six2Q62232 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.05■□□□□ 0.64
Six2Q62232 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six2Q62232 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six2Q62232 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
Six2Q62232 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six2Q62232 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six2Q62232 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six2Q62232 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six2Q62232 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six2Q62232 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Six2Q62232 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six2Q62232 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Six2Q62232 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six2Q62232 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.04■□□□□ 0.64
Six2Q62232 Gm10602-201ENSMUST00000098239 609 ntBASIC19.04■□□□□ 0.64
Six2Q62232 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Six2Q62232 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six2Q62232 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Six2Q62232 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Six2Q62232 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Six2Q62232 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Six2Q62232 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six2Q62232 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Six2Q62232 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six2Q62232 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six2Q62232 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six2Q62232 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Six2Q62232 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Six2Q62232 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.03■□□□□ 0.64
Six2Q62232 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms