Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.04■□□□□ 0.96
Ctr9Q62018 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.04■□□□□ 0.96
Ctr9Q62018 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ctr9Q62018 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ctr9Q62018 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ctr9Q62018 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ctr9Q62018 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ctr9Q62018 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ctr9Q62018 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ctr9Q62018 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ctr9Q62018 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ctr9Q62018 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ctr9Q62018 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ctr9Q62018 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.03■□□□□ 0.96
Ctr9Q62018 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.03■□□□□ 0.96
Ctr9Q62018 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Ctr9Q62018 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ctr9Q62018 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ctr9Q62018 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ctr9Q62018 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ctr9Q62018 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ctr9Q62018 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ctr9Q62018 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ctr9Q62018 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.02■□□□□ 0.96
Ctr9Q62018 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ctr9Q62018 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.02■□□□□ 0.96
Ctr9Q62018 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
Ctr9Q62018 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.02■□□□□ 0.96
Ctr9Q62018 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ctr9Q62018 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ctr9Q62018 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
Ctr9Q62018 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
Ctr9Q62018 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ctr9Q62018 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.01■□□□□ 0.95
Ctr9Q62018 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ctr9Q62018 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ctr9Q62018 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ctr9Q62018 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.01■□□□□ 0.95
Ctr9Q62018 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
Ctr9Q62018 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ctr9Q62018 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ctr9Q62018 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ctr9Q62018 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ctr9Q62018 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.01■□□□□ 0.95
Ctr9Q62018 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.01■□□□□ 0.95
Ctr9Q62018 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ctr9Q62018 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ctr9Q62018 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ctr9Q62018 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ctr9Q62018 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ctr9Q62018 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ctr9Q62018 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ctr9Q62018 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ctr9Q62018 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ctr9Q62018 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21■□□□□ 0.95
Ctr9Q62018 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ctr9Q62018 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ctr9Q62018 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ctr9Q62018 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ctr9Q62018 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ctr9Q62018 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ctr9Q62018 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ctr9Q62018 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.99■□□□□ 0.95
Ctr9Q62018 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ctr9Q62018 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ctr9Q62018 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Ctr9Q62018 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.99■□□□□ 0.95
Ctr9Q62018 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ctr9Q62018 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ctr9Q62018 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.99■□□□□ 0.95
Ctr9Q62018 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ctr9Q62018 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ctr9Q62018 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ctr9Q62018 Fst-202ENSMUST00000223640 2612 ntBASIC20.99■□□□□ 0.95
Ctr9Q62018 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ctr9Q62018 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.99■□□□□ 0.95
Ctr9Q62018 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ctr9Q62018 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ctr9Q62018 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.99■□□□□ 0.95
Ctr9Q62018 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Ctr9Q62018 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.98■□□□□ 0.95
Ctr9Q62018 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ctr9Q62018 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ctr9Q62018 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ctr9Q62018 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.98■□□□□ 0.95
Ctr9Q62018 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ctr9Q62018 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.98■□□□□ 0.95
Ctr9Q62018 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.98■□□□□ 0.95
Ctr9Q62018 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ctr9Q62018 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.98■□□□□ 0.95
Ctr9Q62018 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ctr9Q62018 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Ctr9Q62018 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ctr9Q62018 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ctr9Q62018 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctr9Q62018 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctr9Q62018 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctr9Q62018 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ctr9Q62018 Gm12382-201ENSMUST00000122005 922 ntBASIC20.97■□□□□ 0.95
Ctr9Q62018 Mir5122-201ENSMUST00000175004 89 ntBASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms