Protein–RNA interactions for Protein: Q61644

Pacsin1, Protein kinase C and casein kinase substrate in neurons protein 1, mousemouse

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pacsin1Q61644 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pacsin1Q61644 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.18■□□□□ 0.66
Pacsin1Q61644 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pacsin1Q61644 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pacsin1Q61644 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pacsin1Q61644 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pacsin1Q61644 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pacsin1Q61644 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pacsin1Q61644 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.18■□□□□ 0.66
Pacsin1Q61644 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.18■□□□□ 0.66
Pacsin1Q61644 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pacsin1Q61644 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pacsin1Q61644 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pacsin1Q61644 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pacsin1Q61644 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pacsin1Q61644 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.17■□□□□ 0.66
Pacsin1Q61644 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pacsin1Q61644 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pacsin1Q61644 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Pacsin1Q61644 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.17■□□□□ 0.66
Pacsin1Q61644 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pacsin1Q61644 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pacsin1Q61644 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pacsin1Q61644 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pacsin1Q61644 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pacsin1Q61644 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.17■□□□□ 0.66
Pacsin1Q61644 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pacsin1Q61644 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pacsin1Q61644 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pacsin1Q61644 Gm22325-201ENSMUST00000158904 308 ntBASIC19.16■□□□□ 0.66
Pacsin1Q61644 Gm26524-201ENSMUST00000192339 390 ntBASIC19.16■□□□□ 0.66
Pacsin1Q61644 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pacsin1Q61644 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pacsin1Q61644 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pacsin1Q61644 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pacsin1Q61644 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.16■□□□□ 0.66
Pacsin1Q61644 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pacsin1Q61644 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pacsin1Q61644 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pacsin1Q61644 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Pacsin1Q61644 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pacsin1Q61644 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pacsin1Q61644 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pacsin1Q61644 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pacsin1Q61644 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pacsin1Q61644 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pacsin1Q61644 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.15■□□□□ 0.66
Pacsin1Q61644 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pacsin1Q61644 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.15■□□□□ 0.66
Pacsin1Q61644 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pacsin1Q61644 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pacsin1Q61644 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pacsin1Q61644 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.15■□□□□ 0.66
Pacsin1Q61644 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pacsin1Q61644 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pacsin1Q61644 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pacsin1Q61644 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
Pacsin1Q61644 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pacsin1Q61644 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.14■□□□□ 0.65
Pacsin1Q61644 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.14■□□□□ 0.65
Pacsin1Q61644 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pacsin1Q61644 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pacsin1Q61644 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pacsin1Q61644 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pacsin1Q61644 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pacsin1Q61644 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.14■□□□□ 0.65
Pacsin1Q61644 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pacsin1Q61644 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Pacsin1Q61644 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pacsin1Q61644 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pacsin1Q61644 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pacsin1Q61644 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pacsin1Q61644 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pacsin1Q61644 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pacsin1Q61644 Gm5408-201ENSMUST00000197998 747 ntBASIC19.13■□□□□ 0.65
Pacsin1Q61644 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pacsin1Q61644 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pacsin1Q61644 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pacsin1Q61644 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pacsin1Q61644 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pacsin1Q61644 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pacsin1Q61644 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pacsin1Q61644 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pacsin1Q61644 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pacsin1Q61644 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.12■□□□□ 0.65
Pacsin1Q61644 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pacsin1Q61644 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pacsin1Q61644 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pacsin1Q61644 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pacsin1Q61644 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pacsin1Q61644 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pacsin1Q61644 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pacsin1Q61644 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pacsin1Q61644 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pacsin1Q61644 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pacsin1Q61644 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pacsin1Q61644 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pacsin1Q61644 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pacsin1Q61644 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pacsin1Q61644 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms