Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd1Q61466 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd1Q61466 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd1Q61466 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.62■□□□□ 0.57
Smarcd1Q61466 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd1Q61466 Gm10418-201ENSMUST00000100943 576 ntBASIC18.62■□□□□ 0.57
Smarcd1Q61466 Gm715-201ENSMUST00000117865 831 ntBASIC18.62■□□□□ 0.57
Smarcd1Q61466 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.62■□□□□ 0.57
Smarcd1Q61466 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.62■□□□□ 0.57
Smarcd1Q61466 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd1Q61466 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd1Q61466 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd1Q61466 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Smarcd1Q61466 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd1Q61466 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd1Q61466 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd1Q61466 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd1Q61466 Fst-202ENSMUST00000223640 2612 ntBASIC18.62■□□□□ 0.57
Smarcd1Q61466 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd1Q61466 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Smarcd1Q61466 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Smarcd1Q61466 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd1Q61466 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd1Q61466 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd1Q61466 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.6■□□□□ 0.57
Smarcd1Q61466 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd1Q61466 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Smarcd1Q61466 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd1Q61466 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.59■□□□□ 0.57
Smarcd1Q61466 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.59■□□□□ 0.57
Smarcd1Q61466 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd1Q61466 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.59■□□□□ 0.57
Smarcd1Q61466 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd1Q61466 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.59■□□□□ 0.57
Smarcd1Q61466 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd1Q61466 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd1Q61466 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd1Q61466 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd1Q61466 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd1Q61466 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd1Q61466 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcd1Q61466 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Smarcd1Q61466 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.58■□□□□ 0.56
Smarcd1Q61466 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd1Q61466 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd1Q61466 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd1Q61466 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd1Q61466 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd1Q61466 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd1Q61466 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd1Q61466 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd1Q61466 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd1Q61466 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcd1Q61466 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Smarcd1Q61466 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcd1Q61466 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcd1Q61466 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms