Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clns1aQ61189 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clns1aQ61189 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clns1aQ61189 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Clns1aQ61189 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clns1aQ61189 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clns1aQ61189 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clns1aQ61189 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clns1aQ61189 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clns1aQ61189 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clns1aQ61189 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Clns1aQ61189 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clns1aQ61189 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clns1aQ61189 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Clns1aQ61189 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clns1aQ61189 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clns1aQ61189 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.31■□□□□ 0.04
Clns1aQ61189 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clns1aQ61189 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Clns1aQ61189 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clns1aQ61189 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clns1aQ61189 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clns1aQ61189 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.3■□□□□ 0.04
Clns1aQ61189 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.3■□□□□ 0.04
Clns1aQ61189 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.3■□□□□ 0.04
Clns1aQ61189 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.3■□□□□ 0.04
Clns1aQ61189 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clns1aQ61189 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clns1aQ61189 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clns1aQ61189 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clns1aQ61189 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clns1aQ61189 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clns1aQ61189 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clns1aQ61189 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clns1aQ61189 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Clns1aQ61189 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clns1aQ61189 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clns1aQ61189 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clns1aQ61189 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clns1aQ61189 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clns1aQ61189 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.29■□□□□ 0.04
Clns1aQ61189 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.29■□□□□ 0.04
Clns1aQ61189 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clns1aQ61189 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clns1aQ61189 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Clns1aQ61189 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clns1aQ61189 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clns1aQ61189 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Clns1aQ61189 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clns1aQ61189 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Clns1aQ61189 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clns1aQ61189 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clns1aQ61189 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.29■□□□□ 0.04
Clns1aQ61189 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clns1aQ61189 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clns1aQ61189 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clns1aQ61189 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Clns1aQ61189 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clns1aQ61189 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clns1aQ61189 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.28■□□□□ 0.04
Clns1aQ61189 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.28■□□□□ 0.04
Clns1aQ61189 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clns1aQ61189 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Clns1aQ61189 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Clns1aQ61189 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clns1aQ61189 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clns1aQ61189 Tgds-204ENSMUST00000228543 1594 ntBASIC15.28■□□□□ 0.04
Clns1aQ61189 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clns1aQ61189 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clns1aQ61189 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clns1aQ61189 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.27■□□□□ 0.04
Clns1aQ61189 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clns1aQ61189 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clns1aQ61189 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clns1aQ61189 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clns1aQ61189 Gm45102-201ENSMUST00000207427 857 ntBASIC15.27■□□□□ 0.04
Clns1aQ61189 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clns1aQ61189 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.27■□□□□ 0.04
Clns1aQ61189 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Clns1aQ61189 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clns1aQ61189 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.27■□□□□ 0.03
Clns1aQ61189 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clns1aQ61189 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clns1aQ61189 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clns1aQ61189 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clns1aQ61189 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clns1aQ61189 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clns1aQ61189 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clns1aQ61189 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clns1aQ61189 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clns1aQ61189 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clns1aQ61189 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clns1aQ61189 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clns1aQ61189 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clns1aQ61189 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clns1aQ61189 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clns1aQ61189 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clns1aQ61189 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clns1aQ61189 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clns1aQ61189 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms