Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Tsr1Q5SWD9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tsr1Q5SWD9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tsr1Q5SWD9 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.2■□□□□ 0.66
Tsr1Q5SWD9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tsr1Q5SWD9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tsr1Q5SWD9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tsr1Q5SWD9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.2■□□□□ 0.66
Tsr1Q5SWD9 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.2■□□□□ 0.66
Tsr1Q5SWD9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Tsr1Q5SWD9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Tsr1Q5SWD9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
Tsr1Q5SWD9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tsr1Q5SWD9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tsr1Q5SWD9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tsr1Q5SWD9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tsr1Q5SWD9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Tsr1Q5SWD9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tsr1Q5SWD9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tsr1Q5SWD9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.19■□□□□ 0.66
Tsr1Q5SWD9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tsr1Q5SWD9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tsr1Q5SWD9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tsr1Q5SWD9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.19■□□□□ 0.66
Tsr1Q5SWD9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tsr1Q5SWD9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Tsr1Q5SWD9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tsr1Q5SWD9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tsr1Q5SWD9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tsr1Q5SWD9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tsr1Q5SWD9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tsr1Q5SWD9 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.19■□□□□ 0.66
Tsr1Q5SWD9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.18■□□□□ 0.66
Tsr1Q5SWD9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tsr1Q5SWD9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tsr1Q5SWD9 Gm26571-201ENSMUST00000181399 666 ntBASIC19.18■□□□□ 0.66
Tsr1Q5SWD9 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.18■□□□□ 0.66
Tsr1Q5SWD9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tsr1Q5SWD9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tsr1Q5SWD9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tsr1Q5SWD9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tsr1Q5SWD9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.18■□□□□ 0.66
Tsr1Q5SWD9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Tsr1Q5SWD9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Tsr1Q5SWD9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tsr1Q5SWD9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tsr1Q5SWD9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.17■□□□□ 0.66
Tsr1Q5SWD9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tsr1Q5SWD9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tsr1Q5SWD9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tsr1Q5SWD9 Gm13234-201ENSMUST00000120010 747 ntBASIC19.17■□□□□ 0.66
Tsr1Q5SWD9 Gm42569-201ENSMUST00000200539 472 ntBASIC19.17■□□□□ 0.66
Tsr1Q5SWD9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.17■□□□□ 0.66
Tsr1Q5SWD9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tsr1Q5SWD9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Tsr1Q5SWD9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tsr1Q5SWD9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tsr1Q5SWD9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tsr1Q5SWD9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.17■□□□□ 0.66
Tsr1Q5SWD9 Reep4-203ENSMUST00000226563 1444 ntBASIC19.17■□□□□ 0.66
Tsr1Q5SWD9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tsr1Q5SWD9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tsr1Q5SWD9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tsr1Q5SWD9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tsr1Q5SWD9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tsr1Q5SWD9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tsr1Q5SWD9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tsr1Q5SWD9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tsr1Q5SWD9 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.16■□□□□ 0.66
Tsr1Q5SWD9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tsr1Q5SWD9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tsr1Q5SWD9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.14■□□□□ 0.66
Tsr1Q5SWD9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tsr1Q5SWD9 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.14■□□□□ 0.65
Tsr1Q5SWD9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms