Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-1Q5R1I8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-1Q5R1I8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.17□□□□□ -0.46
Trav3-1Q5R1I8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-1Q5R1I8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms