Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn2bQ56A07 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn2bQ56A07 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn2bQ56A07 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn2bQ56A07 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn2bQ56A07 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn2bQ56A07 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn2bQ56A07 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Scn2bQ56A07 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn2bQ56A07 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn2bQ56A07 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scn2bQ56A07 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.71■□□□□ 0.43
Scn2bQ56A07 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scn2bQ56A07 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scn2bQ56A07 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn2bQ56A07 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn2bQ56A07 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn2bQ56A07 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn2bQ56A07 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Scn2bQ56A07 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Scn2bQ56A07 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Scn2bQ56A07 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.7■□□□□ 0.42
Scn2bQ56A07 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.7■□□□□ 0.42
Scn2bQ56A07 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Scn2bQ56A07 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Gm6420-201ENSMUST00000193885 723 ntBASIC17.7■□□□□ 0.42
Scn2bQ56A07 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn2bQ56A07 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.69■□□□□ 0.42
Scn2bQ56A07 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.69■□□□□ 0.42
Scn2bQ56A07 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scn2bQ56A07 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scn2bQ56A07 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn2bQ56A07 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn2bQ56A07 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn2bQ56A07 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scn2bQ56A07 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn2bQ56A07 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn2bQ56A07 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn2bQ56A07 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Scn2bQ56A07 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn2bQ56A07 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn2bQ56A07 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Scn2bQ56A07 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn2bQ56A07 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Scn2bQ56A07 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn2bQ56A07 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn2bQ56A07 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn2bQ56A07 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn2bQ56A07 Nespas-201ENSMUST00000143738 1083 ntBASIC17.68■□□□□ 0.42
Scn2bQ56A07 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.68■□□□□ 0.42
Scn2bQ56A07 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.68■□□□□ 0.42
Scn2bQ56A07 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn2bQ56A07 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn2bQ56A07 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Scn2bQ56A07 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn2bQ56A07 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn2bQ56A07 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Scn2bQ56A07 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scn2bQ56A07 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn2bQ56A07 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn2bQ56A07 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn2bQ56A07 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn2bQ56A07 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn2bQ56A07 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn2bQ56A07 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scn2bQ56A07 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn2bQ56A07 Gm22325-201ENSMUST00000158904 308 ntBASIC17.66■□□□□ 0.42
Scn2bQ56A07 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.66■□□□□ 0.42
Scn2bQ56A07 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.66■□□□□ 0.42
Scn2bQ56A07 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Scn2bQ56A07 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn2bQ56A07 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn2bQ56A07 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scn2bQ56A07 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.66■□□□□ 0.42
Scn2bQ56A07 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Scn2bQ56A07 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn2bQ56A07 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn2bQ56A07 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn2bQ56A07 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Scn2bQ56A07 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2bQ56A07 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2bQ56A07 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2bQ56A07 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms