Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdkl5Q3UTQ8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdkl5Q3UTQ8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Cdkl5Q3UTQ8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdkl5Q3UTQ8 Gm2559-201ENSMUST00000201323 363 ntBASIC20.74■□□□□ 0.91
Cdkl5Q3UTQ8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Cdkl5Q3UTQ8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdkl5Q3UTQ8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdkl5Q3UTQ8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.74■□□□□ 0.91
Cdkl5Q3UTQ8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdkl5Q3UTQ8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdkl5Q3UTQ8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdkl5Q3UTQ8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Cdkl5Q3UTQ8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cdkl5Q3UTQ8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdkl5Q3UTQ8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdkl5Q3UTQ8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdkl5Q3UTQ8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdkl5Q3UTQ8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdkl5Q3UTQ8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdkl5Q3UTQ8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdkl5Q3UTQ8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdkl5Q3UTQ8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdkl5Q3UTQ8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
Cdkl5Q3UTQ8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkl5Q3UTQ8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cdkl5Q3UTQ8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkl5Q3UTQ8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkl5Q3UTQ8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Cdkl5Q3UTQ8 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.72■□□□□ 0.91
Cdkl5Q3UTQ8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.72■□□□□ 0.91
Cdkl5Q3UTQ8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.72■□□□□ 0.91
Cdkl5Q3UTQ8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkl5Q3UTQ8 Gm4968-201ENSMUST00000071458 858 ntBASIC20.72■□□□□ 0.91
Cdkl5Q3UTQ8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkl5Q3UTQ8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkl5Q3UTQ8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkl5Q3UTQ8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkl5Q3UTQ8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkl5Q3UTQ8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cdkl5Q3UTQ8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.91
Cdkl5Q3UTQ8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdkl5Q3UTQ8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cdkl5Q3UTQ8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cdkl5Q3UTQ8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdkl5Q3UTQ8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.7■□□□□ 0.9
Cdkl5Q3UTQ8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cdkl5Q3UTQ8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdkl5Q3UTQ8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdkl5Q3UTQ8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdkl5Q3UTQ8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.7■□□□□ 0.9
Cdkl5Q3UTQ8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdkl5Q3UTQ8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdkl5Q3UTQ8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdkl5Q3UTQ8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdkl5Q3UTQ8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdkl5Q3UTQ8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Cdkl5Q3UTQ8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdkl5Q3UTQ8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdkl5Q3UTQ8 Gm11927-201ENSMUST00000118472 759 ntBASIC20.69■□□□□ 0.9
Cdkl5Q3UTQ8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.69■□□□□ 0.9
Cdkl5Q3UTQ8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cdkl5Q3UTQ8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdkl5Q3UTQ8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdkl5Q3UTQ8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cdkl5Q3UTQ8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdkl5Q3UTQ8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl5Q3UTQ8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl5Q3UTQ8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl5Q3UTQ8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl5Q3UTQ8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.68■□□□□ 0.9
Cdkl5Q3UTQ8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.68■□□□□ 0.9
Cdkl5Q3UTQ8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl5Q3UTQ8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl5Q3UTQ8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl5Q3UTQ8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl5Q3UTQ8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl5Q3UTQ8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl5Q3UTQ8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl5Q3UTQ8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl5Q3UTQ8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl5Q3UTQ8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms