Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Carmil3Q3UFQ8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Carmil3Q3UFQ8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.59■■□□□ 1.05
Carmil3Q3UFQ8 Gm27463-201ENSMUST00000183569 57 ntBASIC21.59■■□□□ 1.05
Carmil3Q3UFQ8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.59■■□□□ 1.05
Carmil3Q3UFQ8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Carmil3Q3UFQ8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Carmil3Q3UFQ8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
Carmil3Q3UFQ8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Carmil3Q3UFQ8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Carmil3Q3UFQ8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Carmil3Q3UFQ8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Carmil3Q3UFQ8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Carmil3Q3UFQ8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
Carmil3Q3UFQ8 Gm21362-201ENSMUST00000194272 928 ntBASIC21.58■■□□□ 1.04
Carmil3Q3UFQ8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Carmil3Q3UFQ8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Carmil3Q3UFQ8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Carmil3Q3UFQ8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Carmil3Q3UFQ8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Carmil3Q3UFQ8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Carmil3Q3UFQ8 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.57■■□□□ 1.04
Carmil3Q3UFQ8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Carmil3Q3UFQ8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Carmil3Q3UFQ8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Carmil3Q3UFQ8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Carmil3Q3UFQ8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Carmil3Q3UFQ8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Carmil3Q3UFQ8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Carmil3Q3UFQ8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Carmil3Q3UFQ8 Gm12085-201ENSMUST00000119263 940 ntBASIC21.56■■□□□ 1.04
Carmil3Q3UFQ8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.56■■□□□ 1.04
Carmil3Q3UFQ8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Carmil3Q3UFQ8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.56■■□□□ 1.04
Carmil3Q3UFQ8 Gm10517-202ENSMUST00000192970 758 ntBASIC21.56■■□□□ 1.04
Carmil3Q3UFQ8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.56■■□□□ 1.04
Carmil3Q3UFQ8 Gm10819-201ENSMUST00000099988 561 ntBASIC21.56■■□□□ 1.04
Carmil3Q3UFQ8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Carmil3Q3UFQ8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Carmil3Q3UFQ8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Carmil3Q3UFQ8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Carmil3Q3UFQ8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Carmil3Q3UFQ8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Carmil3Q3UFQ8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Carmil3Q3UFQ8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Carmil3Q3UFQ8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Carmil3Q3UFQ8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Carmil3Q3UFQ8 Gm18032-201ENSMUST00000222541 538 ntBASIC21.55■■□□□ 1.04
Carmil3Q3UFQ8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Carmil3Q3UFQ8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Carmil3Q3UFQ8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Carmil3Q3UFQ8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Carmil3Q3UFQ8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Carmil3Q3UFQ8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Carmil3Q3UFQ8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
Carmil3Q3UFQ8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.54■■□□□ 1.04
Carmil3Q3UFQ8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Carmil3Q3UFQ8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.54■■□□□ 1.04
Carmil3Q3UFQ8 Gm45058-201ENSMUST00000205810 766 ntBASIC21.54■■□□□ 1.04
Carmil3Q3UFQ8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Carmil3Q3UFQ8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Carmil3Q3UFQ8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Carmil3Q3UFQ8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Carmil3Q3UFQ8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Carmil3Q3UFQ8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Carmil3Q3UFQ8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Carmil3Q3UFQ8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Carmil3Q3UFQ8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Carmil3Q3UFQ8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Carmil3Q3UFQ8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Carmil3Q3UFQ8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Carmil3Q3UFQ8 Gm10013-201ENSMUST00000106074 672 ntBASIC21.53■■□□□ 1.04
Carmil3Q3UFQ8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Carmil3Q3UFQ8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.53■■□□□ 1.04
Carmil3Q3UFQ8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Carmil3Q3UFQ8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Carmil3Q3UFQ8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Carmil3Q3UFQ8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Carmil3Q3UFQ8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Carmil3Q3UFQ8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.52■■□□□ 1.04
Carmil3Q3UFQ8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Carmil3Q3UFQ8 Gm38027-201ENSMUST00000192315 235 ntBASIC21.52■■□□□ 1.04
Carmil3Q3UFQ8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC21.52■■□□□ 1.04
Carmil3Q3UFQ8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.52■■□□□ 1.04
Carmil3Q3UFQ8 Gm7367-201ENSMUST00000057611 492 ntBASIC21.52■■□□□ 1.04
Carmil3Q3UFQ8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Carmil3Q3UFQ8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Carmil3Q3UFQ8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Carmil3Q3UFQ8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Carmil3Q3UFQ8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Carmil3Q3UFQ8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Carmil3Q3UFQ8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
Carmil3Q3UFQ8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.51■■□□□ 1.03
Carmil3Q3UFQ8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Carmil3Q3UFQ8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Carmil3Q3UFQ8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Carmil3Q3UFQ8 Gm23634-201ENSMUST00000175071 91 ntBASIC21.51■■□□□ 1.03
Carmil3Q3UFQ8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Carmil3Q3UFQ8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Carmil3Q3UFQ8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms