Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctdnep1Q3TP92 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ctdnep1Q3TP92 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ctdnep1Q3TP92 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.7■□□□□ 0.9
Ctdnep1Q3TP92 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.7■□□□□ 0.9
Ctdnep1Q3TP92 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ctdnep1Q3TP92 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctdnep1Q3TP92 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctdnep1Q3TP92 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctdnep1Q3TP92 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctdnep1Q3TP92 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctdnep1Q3TP92 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctdnep1Q3TP92 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctdnep1Q3TP92 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctdnep1Q3TP92 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.69■□□□□ 0.9
Ctdnep1Q3TP92 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctdnep1Q3TP92 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ctdnep1Q3TP92 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctdnep1Q3TP92 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.69■□□□□ 0.9
Ctdnep1Q3TP92 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctdnep1Q3TP92 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctdnep1Q3TP92 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ctdnep1Q3TP92 Dio3-201ENSMUST00000097228 1449 ntBASIC20.69■□□□□ 0.9
Ctdnep1Q3TP92 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctdnep1Q3TP92 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.68■□□□□ 0.9
Ctdnep1Q3TP92 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctdnep1Q3TP92 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.68■□□□□ 0.9
Ctdnep1Q3TP92 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctdnep1Q3TP92 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctdnep1Q3TP92 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctdnep1Q3TP92 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctdnep1Q3TP92 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctdnep1Q3TP92 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.68■□□□□ 0.9
Ctdnep1Q3TP92 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.68■□□□□ 0.9
Ctdnep1Q3TP92 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.68■□□□□ 0.9
Ctdnep1Q3TP92 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctdnep1Q3TP92 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ctdnep1Q3TP92 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctdnep1Q3TP92 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctdnep1Q3TP92 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctdnep1Q3TP92 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.67■□□□□ 0.9
Ctdnep1Q3TP92 Mir2861-201ENSMUST00000175539 82 ntBASIC20.67■□□□□ 0.9
Ctdnep1Q3TP92 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Ctdnep1Q3TP92 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctdnep1Q3TP92 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ctdnep1Q3TP92 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.67■□□□□ 0.9
Ctdnep1Q3TP92 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.67■□□□□ 0.9
Ctdnep1Q3TP92 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctdnep1Q3TP92 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctdnep1Q3TP92 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdnep1Q3TP92 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdnep1Q3TP92 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdnep1Q3TP92 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdnep1Q3TP92 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdnep1Q3TP92 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdnep1Q3TP92 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
Ctdnep1Q3TP92 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdnep1Q3TP92 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdnep1Q3TP92 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdnep1Q3TP92 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.66■□□□□ 0.9
Ctdnep1Q3TP92 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdnep1Q3TP92 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdnep1Q3TP92 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctdnep1Q3TP92 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctdnep1Q3TP92 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctdnep1Q3TP92 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.65■□□□□ 0.9
Ctdnep1Q3TP92 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctdnep1Q3TP92 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ctdnep1Q3TP92 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctdnep1Q3TP92 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctdnep1Q3TP92 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ctdnep1Q3TP92 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ctdnep1Q3TP92 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Ctdnep1Q3TP92 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ctdnep1Q3TP92 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ctdnep1Q3TP92 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ctdnep1Q3TP92 Gm12896-201ENSMUST00000118430 226 ntBASIC20.64■□□□□ 0.89
Ctdnep1Q3TP92 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.64■□□□□ 0.89
Ctdnep1Q3TP92 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ctdnep1Q3TP92 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ctdnep1Q3TP92 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ctdnep1Q3TP92 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ctdnep1Q3TP92 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ctdnep1Q3TP92 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.64■□□□□ 0.89
Ctdnep1Q3TP92 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ctdnep1Q3TP92 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdnep1Q3TP92 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdnep1Q3TP92 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdnep1Q3TP92 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdnep1Q3TP92 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdnep1Q3TP92 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdnep1Q3TP92 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdnep1Q3TP92 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ctdnep1Q3TP92 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdnep1Q3TP92 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ctdnep1Q3TP92 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.63■□□□□ 0.89
Ctdnep1Q3TP92 Gm11249-201ENSMUST00000117071 859 ntBASIC20.63■□□□□ 0.89
Ctdnep1Q3TP92 Gm2559-201ENSMUST00000201323 363 ntBASIC20.63■□□□□ 0.89
Ctdnep1Q3TP92 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctdnep1Q3TP92 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms