Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col9a1Q05722 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col9a1Q05722 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.57■□□□□ 0.4
Col9a1Q05722 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col9a1Q05722 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col9a1Q05722 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.57■□□□□ 0.4
Col9a1Q05722 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col9a1Q05722 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col9a1Q05722 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Col9a1Q05722 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Col9a1Q05722 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Col9a1Q05722 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Col9a1Q05722 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.56■□□□□ 0.4
Col9a1Q05722 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.56■□□□□ 0.4
Col9a1Q05722 Gm27000-201ENSMUST00000182943 842 ntBASIC17.56■□□□□ 0.4
Col9a1Q05722 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.56■□□□□ 0.4
Col9a1Q05722 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.56■□□□□ 0.4
Col9a1Q05722 Rps4l-201ENSMUST00000071745 943 ntBASIC17.56■□□□□ 0.4
Col9a1Q05722 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col9a1Q05722 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col9a1Q05722 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col9a1Q05722 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col9a1Q05722 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col9a1Q05722 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col9a1Q05722 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.55■□□□□ 0.4
Col9a1Q05722 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col9a1Q05722 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col9a1Q05722 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col9a1Q05722 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col9a1Q05722 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col9a1Q05722 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col9a1Q05722 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.54■□□□□ 0.4
Col9a1Q05722 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col9a1Q05722 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Col9a1Q05722 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col9a1Q05722 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Col9a1Q05722 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col9a1Q05722 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col9a1Q05722 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.54■□□□□ 0.4
Col9a1Q05722 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col9a1Q05722 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.54■□□□□ 0.4
Col9a1Q05722 Gm7213-201ENSMUST00000215977 950 ntBASIC17.54■□□□□ 0.4
Col9a1Q05722 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col9a1Q05722 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col9a1Q05722 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col9a1Q05722 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col9a1Q05722 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col9a1Q05722 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col9a1Q05722 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col9a1Q05722 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col9a1Q05722 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col9a1Q05722 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col9a1Q05722 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col9a1Q05722 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col9a1Q05722 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col9a1Q05722 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col9a1Q05722 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.53■□□□□ 0.4
Col9a1Q05722 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col9a1Q05722 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Col9a1Q05722 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col9a1Q05722 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col9a1Q05722 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col9a1Q05722 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Col9a1Q05722 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col9a1Q05722 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Col9a1Q05722 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col9a1Q05722 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col9a1Q05722 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col9a1Q05722 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Col9a1Q05722 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col9a1Q05722 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col9a1Q05722 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col9a1Q05722 Mir770-201ENSMUST00000103252 94 ntBASIC17.52■□□□□ 0.4
Col9a1Q05722 Gm13323-201ENSMUST00000120245 1151 ntBASIC17.52■□□□□ 0.4
Col9a1Q05722 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col9a1Q05722 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.52■□□□□ 0.4
Col9a1Q05722 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.52■□□□□ 0.4
Col9a1Q05722 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Col9a1Q05722 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Col9a1Q05722 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col9a1Q05722 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col9a1Q05722 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col9a1Q05722 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Col9a1Q05722 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col9a1Q05722 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.51■□□□□ 0.39
Col9a1Q05722 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.51■□□□□ 0.39
Col9a1Q05722 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Col9a1Q05722 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col9a1Q05722 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col9a1Q05722 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col9a1Q05722 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col9a1Q05722 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col9a1Q05722 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col9a1Q05722 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col9a1Q05722 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col9a1Q05722 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col9a1Q05722 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC17.5■□□□□ 0.39
Col9a1Q05722 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col9a1Q05722 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Col9a1Q05722 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms