Protein–RNA interactions for Protein: P70671

Irf3, Interferon regulatory factor 3, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf3P70671 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.45■□□□□ 0.7
Irf3P70671 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Irf3P70671 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.45■□□□□ 0.7
Irf3P70671 Gm30025-201ENSMUST00000218555 728 ntBASIC19.45■□□□□ 0.7
Irf3P70671 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Irf3P70671 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.45■□□□□ 0.7
Irf3P70671 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.45■□□□□ 0.7
Irf3P70671 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Irf3P70671 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf3P70671 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf3P70671 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf3P70671 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf3P70671 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.44■□□□□ 0.7
Irf3P70671 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Irf3P70671 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.44■□□□□ 0.7
Irf3P70671 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.44■□□□□ 0.7
Irf3P70671 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf3P70671 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf3P70671 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf3P70671 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf3P70671 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf3P70671 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf3P70671 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Irf3P70671 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.44■□□□□ 0.7
Irf3P70671 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Irf3P70671 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.43■□□□□ 0.7
Irf3P70671 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf3P70671 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf3P70671 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf3P70671 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Irf3P70671 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf3P70671 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf3P70671 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Irf3P70671 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf3P70671 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Irf3P70671 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf3P70671 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.43■□□□□ 0.7
Irf3P70671 Gm43799-201ENSMUST00000201845 579 ntBASIC19.43■□□□□ 0.7
Irf3P70671 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.43■□□□□ 0.7
Irf3P70671 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Irf3P70671 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf3P70671 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf3P70671 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Irf3P70671 Gm13836-201ENSMUST00000121159 501 ntBASIC19.42■□□□□ 0.7
Irf3P70671 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Irf3P70671 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Irf3P70671 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf3P70671 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf3P70671 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf3P70671 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Irf3P70671 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Irf3P70671 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf3P70671 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf3P70671 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf3P70671 Gm6433-201ENSMUST00000118634 875 ntBASIC19.41■□□□□ 0.7
Irf3P70671 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Irf3P70671 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Irf3P70671 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.41■□□□□ 0.7
Irf3P70671 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Irf3P70671 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf3P70671 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.41■□□□□ 0.7
Irf3P70671 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf3P70671 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf3P70671 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Irf3P70671 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Irf3P70671 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.4■□□□□ 0.7
Irf3P70671 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Irf3P70671 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Irf3P70671 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.4■□□□□ 0.7
Irf3P70671 Gm38027-201ENSMUST00000192315 235 ntBASIC19.4■□□□□ 0.7
Irf3P70671 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.4■□□□□ 0.7
Irf3P70671 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.4■□□□□ 0.7
Irf3P70671 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Irf3P70671 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf3P70671 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf3P70671 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf3P70671 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf3P70671 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf3P70671 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Irf3P70671 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf3P70671 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Irf3P70671 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Irf3P70671 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Irf3P70671 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Irf3P70671 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Irf3P70671 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf3P70671 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.39■□□□□ 0.69
Irf3P70671 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf3P70671 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Irf3P70671 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Irf3P70671 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf3P70671 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf3P70671 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf3P70671 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf3P70671 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf3P70671 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf3P70671 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf3P70671 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf3P70671 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Irf3P70671 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms