Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Cxcr4P70658 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcr4P70658 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcr4P70658 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcr4P70658 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcr4P70658 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcr4P70658 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcr4P70658 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcr4P70658 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcr4P70658 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcr4P70658 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcr4P70658 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcr4P70658 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcr4P70658 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cxcr4P70658 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Cxcr4P70658 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcr4P70658 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.77■□□□□ 0.28
Cxcr4P70658 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcr4P70658 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcr4P70658 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.77■□□□□ 0.28
Cxcr4P70658 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcr4P70658 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcr4P70658 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Cxcr4P70658 Gm6211-202ENSMUST00000167849 925 ntBASIC16.77■□□□□ 0.28
Cxcr4P70658 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Cxcr4P70658 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcr4P70658 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcr4P70658 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcr4P70658 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cxcr4P70658 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Cxcr4P70658 Tgds-204ENSMUST00000228543 1594 ntBASIC16.77■□□□□ 0.27
Cxcr4P70658 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcr4P70658 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcr4P70658 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcr4P70658 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcr4P70658 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.76■□□□□ 0.27
Cxcr4P70658 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cxcr4P70658 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cxcr4P70658 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcr4P70658 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcr4P70658 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcr4P70658 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcr4P70658 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcr4P70658 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcr4P70658 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcr4P70658 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.75■□□□□ 0.27
Cxcr4P70658 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcr4P70658 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcr4P70658 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcr4P70658 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcr4P70658 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcr4P70658 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcr4P70658 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcr4P70658 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcr4P70658 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Cxcr4P70658 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cxcr4P70658 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcr4P70658 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcr4P70658 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cxcr4P70658 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcr4P70658 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcr4P70658 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcr4P70658 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcr4P70658 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcr4P70658 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcr4P70658 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcr4P70658 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcr4P70658 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcr4P70658 Gm13148-201ENSMUST00000118892 745 ntBASIC16.74■□□□□ 0.27
Cxcr4P70658 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.74■□□□□ 0.27
Cxcr4P70658 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.74■□□□□ 0.27
Cxcr4P70658 Gm5408-201ENSMUST00000197998 747 ntBASIC16.74■□□□□ 0.27
Cxcr4P70658 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cxcr4P70658 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcr4P70658 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcr4P70658 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cxcr4P70658 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cxcr4P70658 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcr4P70658 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcr4P70658 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcr4P70658 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcr4P70658 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcr4P70658 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcr4P70658 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcr4P70658 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcr4P70658 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcr4P70658 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcr4P70658 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcr4P70658 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcr4P70658 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Cxcr4P70658 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.73■□□□□ 0.27
Cxcr4P70658 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.73■□□□□ 0.27
Cxcr4P70658 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.73■□□□□ 0.27
Cxcr4P70658 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcr4P70658 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcr4P70658 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcr4P70658 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcr4P70658 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcr4P70658 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcr4P70658 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms