Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.13■□□□□ 0.97
Lrch1P62046 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrch1P62046 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrch1P62046 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lrch1P62046 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Lrch1P62046 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC21.13■□□□□ 0.97
Lrch1P62046 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC21.13■□□□□ 0.97
Lrch1P62046 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lrch1P62046 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrch1P62046 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.13■□□□□ 0.97
Lrch1P62046 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrch1P62046 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Lrch1P62046 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC21.12■□□□□ 0.97
Lrch1P62046 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lrch1P62046 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lrch1P62046 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lrch1P62046 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrch1P62046 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrch1P62046 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Lrch1P62046 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrch1P62046 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Lrch1P62046 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.11■□□□□ 0.97
Lrch1P62046 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Lrch1P62046 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC21.11■□□□□ 0.97
Lrch1P62046 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Lrch1P62046 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrch1P62046 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Lrch1P62046 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrch1P62046 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrch1P62046 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.11■□□□□ 0.97
Lrch1P62046 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrch1P62046 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrch1P62046 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrch1P62046 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lrch1P62046 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lrch1P62046 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lrch1P62046 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Lrch1P62046 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.1■□□□□ 0.97
Lrch1P62046 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lrch1P62046 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lrch1P62046 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Lrch1P62046 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lrch1P62046 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Lrch1P62046 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lrch1P62046 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Lrch1P62046 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lrch1P62046 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lrch1P62046 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lrch1P62046 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Lrch1P62046 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Lrch1P62046 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Lrch1P62046 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lrch1P62046 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lrch1P62046 Golph3-202ENSMUST00000226517 2359 ntBASIC21.09■□□□□ 0.97
Lrch1P62046 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Lrch1P62046 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Lrch1P62046 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lrch1P62046 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Lrch1P62046 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lrch1P62046 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Lrch1P62046 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21.08■□□□□ 0.97
Lrch1P62046 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.08■□□□□ 0.97
Lrch1P62046 Gm24841-201ENSMUST00000158676 357 ntBASIC21.08■□□□□ 0.97
Lrch1P62046 Mir3081-201ENSMUST00000175305 84 ntBASIC21.08■□□□□ 0.97
Lrch1P62046 Gm18115-201ENSMUST00000221209 621 ntBASIC21.08■□□□□ 0.97
Lrch1P62046 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lrch1P62046 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lrch1P62046 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Lrch1P62046 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lrch1P62046 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lrch1P62046 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lrch1P62046 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.07■□□□□ 0.96
Lrch1P62046 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Lrch1P62046 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lrch1P62046 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lrch1P62046 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.07■□□□□ 0.96
Lrch1P62046 Gm25925-201ENSMUST00000158314 306 ntBASIC21.07■□□□□ 0.96
Lrch1P62046 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.07■□□□□ 0.96
Lrch1P62046 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lrch1P62046 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Lrch1P62046 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Lrch1P62046 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lrch1P62046 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lrch1P62046 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.07■□□□□ 0.96
Lrch1P62046 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrch1P62046 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrch1P62046 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lrch1P62046 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrch1P62046 Gm11355-201ENSMUST00000121120 306 ntBASIC21.06■□□□□ 0.96
Lrch1P62046 Gm11950-201ENSMUST00000121615 838 ntBASIC21.06■□□□□ 0.96
Lrch1P62046 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lrch1P62046 Gm7213-201ENSMUST00000215977 950 ntBASIC21.06■□□□□ 0.96
Lrch1P62046 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC21.06■□□□□ 0.96
Lrch1P62046 Mzt1-203ENSMUST00000227948 952 ntBASIC21.06■□□□□ 0.96
Lrch1P62046 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrch1P62046 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lrch1P62046 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lrch1P62046 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrch1P62046 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Lrch1P62046 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms