Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lmo4P61969 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lmo4P61969 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Lmo4P61969 Gm10418-201ENSMUST00000100943 576 ntBASIC14.48□□□□□ -0.09
Lmo4P61969 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lmo4P61969 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lmo4P61969 Gm27463-201ENSMUST00000183569 57 ntBASIC14.48□□□□□ -0.09
Lmo4P61969 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.48□□□□□ -0.09
Lmo4P61969 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Lmo4P61969 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.48□□□□□ -0.09
Lmo4P61969 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lmo4P61969 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lmo4P61969 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lmo4P61969 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Lmo4P61969 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lmo4P61969 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
Lmo4P61969 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.48□□□□□ -0.09
Lmo4P61969 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Lmo4P61969 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lmo4P61969 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lmo4P61969 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lmo4P61969 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Lmo4P61969 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lmo4P61969 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lmo4P61969 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.47□□□□□ -0.09
Lmo4P61969 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lmo4P61969 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lmo4P61969 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.47□□□□□ -0.09
Lmo4P61969 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Lmo4P61969 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lmo4P61969 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lmo4P61969 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lmo4P61969 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lmo4P61969 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lmo4P61969 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lmo4P61969 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Lmo4P61969 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lmo4P61969 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lmo4P61969 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.46□□□□□ -0.09
Lmo4P61969 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Lmo4P61969 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.46□□□□□ -0.09
Lmo4P61969 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.46□□□□□ -0.09
Lmo4P61969 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.46□□□□□ -0.09
Lmo4P61969 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.46□□□□□ -0.09
Lmo4P61969 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Lmo4P61969 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lmo4P61969 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lmo4P61969 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lmo4P61969 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lmo4P61969 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lmo4P61969 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lmo4P61969 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lmo4P61969 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lmo4P61969 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lmo4P61969 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lmo4P61969 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lmo4P61969 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.45□□□□□ -0.1
Lmo4P61969 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lmo4P61969 Gm13401-201ENSMUST00000117074 291 ntBASIC14.45□□□□□ -0.1
Lmo4P61969 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lmo4P61969 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lmo4P61969 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Lmo4P61969 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lmo4P61969 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.45□□□□□ -0.1
Lmo4P61969 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Lmo4P61969 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Lmo4P61969 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.45□□□□□ -0.1
Lmo4P61969 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Lmo4P61969 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.45□□□□□ -0.1
Lmo4P61969 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lmo4P61969 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lmo4P61969 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lmo4P61969 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lmo4P61969 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.45□□□□□ -0.1
Lmo4P61969 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lmo4P61969 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lmo4P61969 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lmo4P61969 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lmo4P61969 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lmo4P61969 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lmo4P61969 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lmo4P61969 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lmo4P61969 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lmo4P61969 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lmo4P61969 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Lmo4P61969 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Lmo4P61969 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.44□□□□□ -0.1
Lmo4P61969 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.44□□□□□ -0.1
Lmo4P61969 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Lmo4P61969 Gm18959-201ENSMUST00000208954 655 ntBASIC14.44□□□□□ -0.1
Lmo4P61969 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Lmo4P61969 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.44□□□□□ -0.1
Lmo4P61969 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.44□□□□□ -0.1
Lmo4P61969 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lmo4P61969 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.44□□□□□ -0.1
Lmo4P61969 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Lmo4P61969 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lmo4P61969 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Lmo4P61969 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.44□□□□□ -0.1
Lmo4P61969 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms