Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a1P61620 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a1P61620 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Sec61a1P61620 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a1P61620 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a1P61620 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a1P61620 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a1P61620 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a1P61620 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a1P61620 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a1P61620 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a1P61620 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a1P61620 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a1P61620 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Sec61a1P61620 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a1P61620 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a1P61620 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a1P61620 Gm7860-201ENSMUST00000121190 879 ntBASIC15.73■□□□□ 0.11
Sec61a1P61620 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a1P61620 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a1P61620 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a1P61620 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a1P61620 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Sec61a1P61620 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.73■□□□□ 0.11
Sec61a1P61620 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Sec61a1P61620 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a1P61620 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sec61a1P61620 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.73■□□□□ 0.11
Sec61a1P61620 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Sec61a1P61620 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a1P61620 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a1P61620 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a1P61620 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a1P61620 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a1P61620 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a1P61620 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a1P61620 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Sec61a1P61620 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a1P61620 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.72■□□□□ 0.11
Sec61a1P61620 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Sec61a1P61620 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a1P61620 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Sec61a1P61620 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a1P61620 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Sec61a1P61620 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sec61a1P61620 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sec61a1P61620 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.71■□□□□ 0.11
Sec61a1P61620 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Sec61a1P61620 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sec61a1P61620 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sec61a1P61620 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Sec61a1P61620 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.71■□□□□ 0.11
Sec61a1P61620 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.71■□□□□ 0.11
Sec61a1P61620 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
Sec61a1P61620 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sec61a1P61620 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sec61a1P61620 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Sec61a1P61620 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sec61a1P61620 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sec61a1P61620 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sec61a1P61620 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sec61a1P61620 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sec61a1P61620 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a1P61620 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Sec61a1P61620 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a1P61620 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sec61a1P61620 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a1P61620 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Sec61a1P61620 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a1P61620 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a1P61620 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a1P61620 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.7■□□□□ 0.1
Sec61a1P61620 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a1P61620 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Sec61a1P61620 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.7■□□□□ 0.1
Sec61a1P61620 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Sec61a1P61620 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sec61a1P61620 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a1P61620 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sec61a1P61620 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a1P61620 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sec61a1P61620 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sec61a1P61620 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a1P61620 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a1P61620 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a1P61620 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a1P61620 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a1P61620 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a1P61620 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a1P61620 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Sec61a1P61620 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.69■□□□□ 0.1
Sec61a1P61620 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.69■□□□□ 0.1
Sec61a1P61620 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a1P61620 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a1P61620 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Sec61a1P61620 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.69■□□□□ 0.1
Sec61a1P61620 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sec61a1P61620 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a1P61620 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a1P61620 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms