Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nub1P54729 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nub1P54729 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nub1P54729 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
Nub1P54729 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nub1P54729 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nub1P54729 Gm11249-201ENSMUST00000117071 859 ntBASIC19.22■□□□□ 0.67
Nub1P54729 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.22■□□□□ 0.67
Nub1P54729 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.22■□□□□ 0.67
Nub1P54729 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nub1P54729 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Nub1P54729 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
Nub1P54729 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nub1P54729 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nub1P54729 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nub1P54729 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.22■□□□□ 0.67
Nub1P54729 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nub1P54729 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.22■□□□□ 0.67
Nub1P54729 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nub1P54729 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nub1P54729 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nub1P54729 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nub1P54729 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nub1P54729 Gm37856-201ENSMUST00000191634 999 ntBASIC19.21■□□□□ 0.67
Nub1P54729 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nub1P54729 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nub1P54729 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nub1P54729 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.21■□□□□ 0.67
Nub1P54729 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nub1P54729 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nub1P54729 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nub1P54729 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nub1P54729 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nub1P54729 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Nub1P54729 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.2■□□□□ 0.66
Nub1P54729 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nub1P54729 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nub1P54729 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Nub1P54729 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nub1P54729 Mtag2-201ENSMUST00000058665 714 ntBASIC19.2■□□□□ 0.66
Nub1P54729 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nub1P54729 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nub1P54729 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.2■□□□□ 0.66
Nub1P54729 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nub1P54729 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nub1P54729 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nub1P54729 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
Nub1P54729 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nub1P54729 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nub1P54729 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nub1P54729 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nub1P54729 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nub1P54729 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nub1P54729 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nub1P54729 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Nub1P54729 Gm10653-202ENSMUST00000139570 835 ntBASIC19.19■□□□□ 0.66
Nub1P54729 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Nub1P54729 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.19■□□□□ 0.66
Nub1P54729 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nub1P54729 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nub1P54729 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nub1P54729 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nub1P54729 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nub1P54729 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nub1P54729 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.19■□□□□ 0.66
Nub1P54729 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nub1P54729 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nub1P54729 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nub1P54729 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nub1P54729 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nub1P54729 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nub1P54729 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nub1P54729 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nub1P54729 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.18■□□□□ 0.66
Nub1P54729 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nub1P54729 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.18■□□□□ 0.66
Nub1P54729 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Nub1P54729 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nub1P54729 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nub1P54729 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Nub1P54729 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nub1P54729 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nub1P54729 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nub1P54729 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nub1P54729 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nub1P54729 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nub1P54729 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nub1P54729 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nub1P54729 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.17■□□□□ 0.66
Nub1P54729 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nub1P54729 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nub1P54729 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.17■□□□□ 0.66
Nub1P54729 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nub1P54729 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nub1P54729 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Nub1P54729 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nub1P54729 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nub1P54729 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nub1P54729 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nub1P54729 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms