Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx2P48379 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx2P48379 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx2P48379 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.72■□□□□ 0.59
Rfx2P48379 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Rfx2P48379 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.72■□□□□ 0.59
Rfx2P48379 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx2P48379 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx2P48379 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx2P48379 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx2P48379 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx2P48379 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.72■□□□□ 0.59
Rfx2P48379 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx2P48379 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx2P48379 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx2P48379 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx2P48379 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx2P48379 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.71■□□□□ 0.59
Rfx2P48379 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.71■□□□□ 0.59
Rfx2P48379 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx2P48379 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.71■□□□□ 0.59
Rfx2P48379 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.71■□□□□ 0.59
Rfx2P48379 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.71■□□□□ 0.59
Rfx2P48379 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx2P48379 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx2P48379 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx2P48379 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx2P48379 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx2P48379 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Rfx2P48379 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx2P48379 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.7■□□□□ 0.58
Rfx2P48379 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx2P48379 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx2P48379 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx2P48379 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx2P48379 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx2P48379 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx2P48379 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.7■□□□□ 0.58
Rfx2P48379 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx2P48379 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx2P48379 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx2P48379 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx2P48379 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx2P48379 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx2P48379 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx2P48379 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx2P48379 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx2P48379 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx2P48379 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx2P48379 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx2P48379 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx2P48379 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx2P48379 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx2P48379 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx2P48379 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx2P48379 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx2P48379 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx2P48379 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx2P48379 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx2P48379 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx2P48379 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rfx2P48379 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx2P48379 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.68■□□□□ 0.58
Rfx2P48379 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
Rfx2P48379 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx2P48379 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx2P48379 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.68■□□□□ 0.58
Rfx2P48379 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.68■□□□□ 0.58
Rfx2P48379 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx2P48379 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.68■□□□□ 0.58
Rfx2P48379 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rfx2P48379 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx2P48379 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.68■□□□□ 0.58
Rfx2P48379 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx2P48379 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Rfx2P48379 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx2P48379 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rfx2P48379 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Rfx2P48379 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx2P48379 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx2P48379 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx2P48379 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.67■□□□□ 0.58
Rfx2P48379 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rfx2P48379 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx2P48379 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rfx2P48379 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx2P48379 Zfp783-201ENSMUST00000095946 670 ntBASIC18.67■□□□□ 0.58
Rfx2P48379 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.67■□□□□ 0.58
Rfx2P48379 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx2P48379 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx2P48379 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx2P48379 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.67■□□□□ 0.58
Rfx2P48379 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx2P48379 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
Rfx2P48379 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx2P48379 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx2P48379 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx2P48379 Mir1199-201ENSMUST00000117015 119 ntBASIC18.66■□□□□ 0.58
Rfx2P48379 Gm715-201ENSMUST00000117865 831 ntBASIC18.66■□□□□ 0.58
Rfx2P48379 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms