Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HmgclP38060 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HmgclP38060 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.61■□□□□ 0.41
HmgclP38060 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HmgclP38060 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HmgclP38060 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
HmgclP38060 Mir2861-201ENSMUST00000175539 82 ntBASIC17.61■□□□□ 0.41
HmgclP38060 Gm10138-203ENSMUST00000206952 366 ntBASIC17.61■□□□□ 0.41
HmgclP38060 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.61■□□□□ 0.41
HmgclP38060 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.61■□□□□ 0.41
HmgclP38060 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
HmgclP38060 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HmgclP38060 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.61■□□□□ 0.41
HmgclP38060 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
HmgclP38060 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HmgclP38060 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HmgclP38060 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HmgclP38060 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HmgclP38060 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HmgclP38060 Idnk-204ENSMUST00000226010 1898 ntBASIC17.61■□□□□ 0.41
HmgclP38060 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HmgclP38060 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HmgclP38060 Gm27275-201ENSMUST00000184318 272 ntBASIC17.6■□□□□ 0.41
HmgclP38060 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.6■□□□□ 0.41
HmgclP38060 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.6■□□□□ 0.41
HmgclP38060 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.6■□□□□ 0.41
HmgclP38060 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HmgclP38060 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HmgclP38060 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HmgclP38060 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HmgclP38060 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HmgclP38060 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HmgclP38060 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.59■□□□□ 0.41
HmgclP38060 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HmgclP38060 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HmgclP38060 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HmgclP38060 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HmgclP38060 Mir6349-201ENSMUST00000184059 97 ntBASIC17.59■□□□□ 0.41
HmgclP38060 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HmgclP38060 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HmgclP38060 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HmgclP38060 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HmgclP38060 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.59■□□□□ 0.41
HmgclP38060 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.59■□□□□ 0.41
HmgclP38060 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HmgclP38060 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HmgclP38060 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HmgclP38060 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HmgclP38060 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HmgclP38060 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HmgclP38060 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
HmgclP38060 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.58■□□□□ 0.41
HmgclP38060 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HmgclP38060 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HmgclP38060 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HmgclP38060 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.58■□□□□ 0.4
HmgclP38060 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HmgclP38060 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HmgclP38060 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HmgclP38060 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
HmgclP38060 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HmgclP38060 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
HmgclP38060 Rarb-207ENSMUST00000225921 2756 ntBASIC17.58■□□□□ 0.4
HmgclP38060 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HmgclP38060 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.57■□□□□ 0.4
HmgclP38060 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
HmgclP38060 Gm13158-201ENSMUST00000122007 736 ntBASIC17.57■□□□□ 0.4
HmgclP38060 Gm37856-201ENSMUST00000191634 999 ntBASIC17.57■□□□□ 0.4
HmgclP38060 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HmgclP38060 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HmgclP38060 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HmgclP38060 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HmgclP38060 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 231.9 ms