Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tpm3P21107 Rps24-207ENSMUST00000224568 714 ntBASIC20.08■□□□□ 0.81
Tpm3P21107 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.08■□□□□ 0.81
Tpm3P21107 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tpm3P21107 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tpm3P21107 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Tpm3P21107 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Tpm3P21107 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tpm3P21107 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tpm3P21107 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tpm3P21107 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm3P21107 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm3P21107 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm3P21107 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm3P21107 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm3P21107 Gm45102-201ENSMUST00000207427 857 ntBASIC20.07■□□□□ 0.8
Tpm3P21107 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.07■□□□□ 0.8
Tpm3P21107 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Tpm3P21107 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Tpm3P21107 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm3P21107 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm3P21107 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
Tpm3P21107 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm3P21107 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Tpm3P21107 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Tpm3P21107 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm3P21107 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm3P21107 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC20.06■□□□□ 0.8
Tpm3P21107 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm3P21107 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Tpm3P21107 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm3P21107 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm3P21107 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm3P21107 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm3P21107 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm3P21107 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm3P21107 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm3P21107 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm3P21107 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm3P21107 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Tpm3P21107 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm3P21107 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm3P21107 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Tpm3P21107 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Tpm3P21107 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm3P21107 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm3P21107 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm3P21107 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm3P21107 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm3P21107 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.05■□□□□ 0.8
Tpm3P21107 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.05■□□□□ 0.8
Tpm3P21107 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.05■□□□□ 0.8
Tpm3P21107 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Tpm3P21107 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm3P21107 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm3P21107 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm3P21107 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm3P21107 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm3P21107 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm3P21107 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm3P21107 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Tpm3P21107 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm3P21107 Gm14117-201ENSMUST00000122417 843 ntBASIC20.04■□□□□ 0.8
Tpm3P21107 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.04■□□□□ 0.8
Tpm3P21107 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm3P21107 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm3P21107 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm3P21107 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.04■□□□□ 0.8
Tpm3P21107 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.04■□□□□ 0.8
Tpm3P21107 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm3P21107 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm3P21107 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm3P21107 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm3P21107 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm3P21107 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm3P21107 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.03■□□□□ 0.8
Tpm3P21107 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm3P21107 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm3P21107 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm3P21107 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Tpm3P21107 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm3P21107 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm3P21107 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm3P21107 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm3P21107 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.03■□□□□ 0.8
Tpm3P21107 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tpm3P21107 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tpm3P21107 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tpm3P21107 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tpm3P21107 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.02■□□□□ 0.8
Tpm3P21107 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tpm3P21107 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tpm3P21107 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Tpm3P21107 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
Tpm3P21107 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tpm3P21107 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tpm3P21107 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Tpm3P21107 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tpm3P21107 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.01■□□□□ 0.79
Tpm3P21107 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms