Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kcna1P16388 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Kcna1P16388 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kcna1P16388 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kcna1P16388 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.29■□□□□ 0.84
Kcna1P16388 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Kcna1P16388 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kcna1P16388 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kcna1P16388 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Kcna1P16388 Mir1199-201ENSMUST00000117015 119 ntBASIC20.29■□□□□ 0.84
Kcna1P16388 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Kcna1P16388 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Kcna1P16388 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.29■□□□□ 0.84
Kcna1P16388 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Kcna1P16388 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kcna1P16388 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Kcna1P16388 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kcna1P16388 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.29■□□□□ 0.84
Kcna1P16388 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kcna1P16388 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Kcna1P16388 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Kcna1P16388 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kcna1P16388 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kcna1P16388 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kcna1P16388 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Kcna1P16388 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.28■□□□□ 0.84
Kcna1P16388 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Kcna1P16388 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kcna1P16388 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.28■□□□□ 0.84
Kcna1P16388 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kcna1P16388 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Kcna1P16388 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.28■□□□□ 0.84
Kcna1P16388 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Kcna1P16388 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kcna1P16388 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Kcna1P16388 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kcna1P16388 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kcna1P16388 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kcna1P16388 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kcna1P16388 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Kcna1P16388 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kcna1P16388 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kcna1P16388 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Kcna1P16388 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.27■□□□□ 0.84
Kcna1P16388 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kcna1P16388 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.27■□□□□ 0.84
Kcna1P16388 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.27■□□□□ 0.84
Kcna1P16388 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.27■□□□□ 0.84
Kcna1P16388 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.27■□□□□ 0.84
Kcna1P16388 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Kcna1P16388 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kcna1P16388 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kcna1P16388 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kcna1P16388 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Kcna1P16388 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kcna1P16388 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kcna1P16388 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kcna1P16388 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Kcna1P16388 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Kcna1P16388 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Kcna1P16388 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Kcna1P16388 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Kcna1P16388 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.26■□□□□ 0.83
Kcna1P16388 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.26■□□□□ 0.83
Kcna1P16388 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kcna1P16388 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kcna1P16388 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kcna1P16388 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Kcna1P16388 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcna1P16388 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcna1P16388 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcna1P16388 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcna1P16388 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcna1P16388 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Kcna1P16388 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcna1P16388 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Kcna1P16388 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Kcna1P16388 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.24■□□□□ 0.83
Kcna1P16388 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcna1P16388 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcna1P16388 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms