Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh3P13705 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh3P13705 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh3P13705 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh3P13705 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.7■□□□□ 0.74
Msh3P13705 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh3P13705 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh3P13705 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh3P13705 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh3P13705 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
Msh3P13705 Mir8112-201ENSMUST00000184382 131 ntBASIC19.7■□□□□ 0.74
Msh3P13705 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.7■□□□□ 0.74
Msh3P13705 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh3P13705 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh3P13705 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh3P13705 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.7■□□□□ 0.74
Msh3P13705 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Msh3P13705 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.7■□□□□ 0.74
Msh3P13705 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Msh3P13705 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh3P13705 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh3P13705 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh3P13705 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh3P13705 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Msh3P13705 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh3P13705 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Msh3P13705 Gm15375-201ENSMUST00000119510 849 ntBASIC19.69■□□□□ 0.74
Msh3P13705 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.69■□□□□ 0.74
Msh3P13705 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
Msh3P13705 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh3P13705 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.69■□□□□ 0.74
Msh3P13705 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh3P13705 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh3P13705 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Msh3P13705 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh3P13705 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.68■□□□□ 0.74
Msh3P13705 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.68■□□□□ 0.74
Msh3P13705 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh3P13705 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.68■□□□□ 0.74
Msh3P13705 Gm37856-201ENSMUST00000191634 999 ntBASIC19.68■□□□□ 0.74
Msh3P13705 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.68■□□□□ 0.74
Msh3P13705 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.68■□□□□ 0.74
Msh3P13705 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh3P13705 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Msh3P13705 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Msh3P13705 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh3P13705 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh3P13705 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh3P13705 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh3P13705 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh3P13705 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh3P13705 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh3P13705 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Msh3P13705 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Msh3P13705 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Msh3P13705 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh3P13705 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.67■□□□□ 0.74
Msh3P13705 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh3P13705 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.67■□□□□ 0.74
Msh3P13705 Gm11643-201ENSMUST00000119578 864 ntBASIC19.67■□□□□ 0.74
Msh3P13705 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Msh3P13705 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh3P13705 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Msh3P13705 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh3P13705 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh3P13705 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Msh3P13705 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Msh3P13705 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Msh3P13705 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.67■□□□□ 0.74
Msh3P13705 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Msh3P13705 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh3P13705 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Msh3P13705 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh3P13705 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh3P13705 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh3P13705 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh3P13705 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh3P13705 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.66■□□□□ 0.74
Msh3P13705 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh3P13705 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Msh3P13705 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh3P13705 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Msh3P13705 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh3P13705 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh3P13705 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh3P13705 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.65■□□□□ 0.74
Msh3P13705 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh3P13705 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
Msh3P13705 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.65■□□□□ 0.74
Msh3P13705 Gm13401-201ENSMUST00000117074 291 ntBASIC19.65■□□□□ 0.74
Msh3P13705 Gm13158-201ENSMUST00000122007 736 ntBASIC19.65■□□□□ 0.74
Msh3P13705 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Msh3P13705 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Msh3P13705 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Msh3P13705 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh3P13705 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.65■□□□□ 0.74
Msh3P13705 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh3P13705 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh3P13705 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh3P13705 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms