Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ShdO88834 Gm11927-201ENSMUST00000118472 759 ntBASIC18.26■□□□□ 0.51
ShdO88834 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.26■□□□□ 0.51
ShdO88834 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ShdO88834 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShdO88834 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ShdO88834 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.26■□□□□ 0.51
ShdO88834 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShdO88834 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ShdO88834 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.26■□□□□ 0.51
ShdO88834 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ShdO88834 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ShdO88834 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShdO88834 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShdO88834 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShdO88834 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ShdO88834 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ShdO88834 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ShdO88834 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ShdO88834 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ShdO88834 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.25■□□□□ 0.51
ShdO88834 Gm12896-201ENSMUST00000118430 226 ntBASIC18.25■□□□□ 0.51
ShdO88834 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.25■□□□□ 0.51
ShdO88834 Gm2559-201ENSMUST00000201323 363 ntBASIC18.25■□□□□ 0.51
ShdO88834 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.25■□□□□ 0.51
ShdO88834 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.25■□□□□ 0.51
ShdO88834 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.25■□□□□ 0.51
ShdO88834 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ShdO88834 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.25■□□□□ 0.51
ShdO88834 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ShdO88834 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ShdO88834 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
ShdO88834 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.25■□□□□ 0.51
ShdO88834 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.24■□□□□ 0.51
ShdO88834 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.24■□□□□ 0.51
ShdO88834 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.24■□□□□ 0.51
ShdO88834 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShdO88834 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShdO88834 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ShdO88834 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShdO88834 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShdO88834 Mtag2-201ENSMUST00000058665 714 ntBASIC18.24■□□□□ 0.51
ShdO88834 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ShdO88834 Dio3-201ENSMUST00000097228 1449 ntBASIC18.23■□□□□ 0.51
ShdO88834 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShdO88834 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShdO88834 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShdO88834 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShdO88834 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShdO88834 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShdO88834 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ShdO88834 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShdO88834 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShdO88834 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ShdO88834 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.23■□□□□ 0.51
ShdO88834 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ShdO88834 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.23■□□□□ 0.51
ShdO88834 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShdO88834 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShdO88834 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ShdO88834 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ShdO88834 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShdO88834 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.22■□□□□ 0.51
ShdO88834 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.22■□□□□ 0.51
ShdO88834 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShdO88834 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShdO88834 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShdO88834 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ShdO88834 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShdO88834 Gm27275-201ENSMUST00000184318 272 ntBASIC18.22■□□□□ 0.51
ShdO88834 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ShdO88834 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShdO88834 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ShdO88834 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShdO88834 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShdO88834 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ShdO88834 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ShdO88834 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShdO88834 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShdO88834 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShdO88834 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShdO88834 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ShdO88834 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShdO88834 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShdO88834 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShdO88834 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShdO88834 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShdO88834 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShdO88834 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.2■□□□□ 0.5
ShdO88834 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShdO88834 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShdO88834 Idnk-204ENSMUST00000226010 1898 ntBASIC18.2■□□□□ 0.5
ShdO88834 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.2■□□□□ 0.5
ShdO88834 Gm12527-201ENSMUST00000117967 564 ntBASIC18.2■□□□□ 0.5
ShdO88834 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ShdO88834 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ShdO88834 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.2■□□□□ 0.5
ShdO88834 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShdO88834 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShdO88834 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms