Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cntnap1O54991 Gm23935-201ENSMUST00000102303 57 ntBASIC23.26■■□□□ 1.31
Cntnap1O54991 Gm24270-201ENSMUST00000102326 57 ntBASIC23.26■■□□□ 1.31
Cntnap1O54991 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Cntnap1O54991 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Cntnap1O54991 Gm24245-201ENSMUST00000157318 57 ntBASIC23.26■■□□□ 1.31
Cntnap1O54991 Gm6736-201ENSMUST00000166583 948 ntBASIC23.26■■□□□ 1.31
Cntnap1O54991 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC23.26■■□□□ 1.31
Cntnap1O54991 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cntnap1O54991 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cntnap1O54991 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cntnap1O54991 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cntnap1O54991 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cntnap1O54991 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cntnap1O54991 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cntnap1O54991 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cntnap1O54991 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cntnap1O54991 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cntnap1O54991 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC23.25■■□□□ 1.31
Cntnap1O54991 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cntnap1O54991 Mir5131-201ENSMUST00000175426 93 ntBASIC23.25■■□□□ 1.31
Cntnap1O54991 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cntnap1O54991 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC23.25■■□□□ 1.31
Cntnap1O54991 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Cntnap1O54991 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cntnap1O54991 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cntnap1O54991 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Cntnap1O54991 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC23.25■■□□□ 1.31
Cntnap1O54991 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cntnap1O54991 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cntnap1O54991 Cxcl14-202ENSMUST00000224801 1467 ntBASIC23.24■■□□□ 1.31
Cntnap1O54991 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cntnap1O54991 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cntnap1O54991 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Cntnap1O54991 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cntnap1O54991 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC23.24■■□□□ 1.31
Cntnap1O54991 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC23.24■■□□□ 1.31
Cntnap1O54991 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC23.24■■□□□ 1.31
Cntnap1O54991 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cntnap1O54991 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cntnap1O54991 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cntnap1O54991 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC23.23■■□□□ 1.31
Cntnap1O54991 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC23.23■■□□□ 1.31
Cntnap1O54991 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC23.23■■□□□ 1.31
Cntnap1O54991 Gm5264-201ENSMUST00000190584 848 ntBASIC23.23■■□□□ 1.31
Cntnap1O54991 Gm5186-201ENSMUST00000218781 920 ntBASIC23.23■■□□□ 1.31
Cntnap1O54991 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cntnap1O54991 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cntnap1O54991 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.22■■□□□ 1.31
Cntnap1O54991 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cntnap1O54991 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC23.22■■□□□ 1.31
Cntnap1O54991 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Cntnap1O54991 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cntnap1O54991 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Cntnap1O54991 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC23.22■■□□□ 1.31
Cntnap1O54991 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC23.22■■□□□ 1.31
Cntnap1O54991 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cntnap1O54991 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cntnap1O54991 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cntnap1O54991 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Cntnap1O54991 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Cntnap1O54991 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Cntnap1O54991 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Cntnap1O54991 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cntnap1O54991 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC23.21■■□□□ 1.31
Cntnap1O54991 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC23.21■■□□□ 1.31
Cntnap1O54991 Gm5364-201ENSMUST00000216789 889 ntBASIC23.21■■□□□ 1.31
Cntnap1O54991 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cntnap1O54991 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cntnap1O54991 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Cntnap1O54991 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cntnap1O54991 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cntnap1O54991 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Cntnap1O54991 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cntnap1O54991 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cntnap1O54991 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cntnap1O54991 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC23.2■■□□□ 1.3
Cntnap1O54991 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.2■■□□□ 1.3
Cntnap1O54991 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cntnap1O54991 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cntnap1O54991 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cntnap1O54991 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cntnap1O54991 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cntnap1O54991 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cntnap1O54991 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC23.19■■□□□ 1.3
Cntnap1O54991 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC23.19■■□□□ 1.3
Cntnap1O54991 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cntnap1O54991 Gm37025-201ENSMUST00000195159 829 ntBASIC23.19■■□□□ 1.3
Cntnap1O54991 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cntnap1O54991 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cntnap1O54991 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC23.19■■□□□ 1.3
Cntnap1O54991 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cntnap1O54991 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cntnap1O54991 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC23.18■■□□□ 1.3
Cntnap1O54991 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.18■■□□□ 1.3
Cntnap1O54991 Gm15372-201ENSMUST00000120729 834 ntBASIC23.18■■□□□ 1.3
Cntnap1O54991 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cntnap1O54991 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cntnap1O54991 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC23.18■■□□□ 1.3
Cntnap1O54991 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms