Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DffbO54788 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
DffbO54788 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.35■□□□□ 0.05
DffbO54788 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DffbO54788 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DffbO54788 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DffbO54788 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DffbO54788 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
DffbO54788 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
DffbO54788 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
DffbO54788 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
DffbO54788 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DffbO54788 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DffbO54788 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
DffbO54788 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
DffbO54788 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.34■□□□□ 0.05
DffbO54788 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
DffbO54788 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
DffbO54788 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DffbO54788 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DffbO54788 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DffbO54788 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.33■□□□□ 0.05
DffbO54788 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
DffbO54788 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
DffbO54788 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
DffbO54788 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
DffbO54788 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.33■□□□□ 0.05
DffbO54788 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
DffbO54788 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DffbO54788 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
DffbO54788 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DffbO54788 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.33■□□□□ 0.04
DffbO54788 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
DffbO54788 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
DffbO54788 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.33■□□□□ 0.04
DffbO54788 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
DffbO54788 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
DffbO54788 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.33■□□□□ 0.04
DffbO54788 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DffbO54788 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DffbO54788 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.33■□□□□ 0.04
DffbO54788 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.32■□□□□ 0.04
DffbO54788 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
DffbO54788 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.32■□□□□ 0.04
DffbO54788 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
DffbO54788 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DffbO54788 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.32■□□□□ 0.04
DffbO54788 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DffbO54788 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.31■□□□□ 0.04
DffbO54788 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
DffbO54788 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
DffbO54788 Gm13234-201ENSMUST00000120010 747 ntBASIC15.31■□□□□ 0.04
DffbO54788 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.31■□□□□ 0.04
DffbO54788 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
DffbO54788 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
DffbO54788 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DffbO54788 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.31■□□□□ 0.04
DffbO54788 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
DffbO54788 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.31■□□□□ 0.04
DffbO54788 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DffbO54788 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DffbO54788 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DffbO54788 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DffbO54788 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.31■□□□□ 0.04
DffbO54788 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DffbO54788 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DffbO54788 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DffbO54788 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DffbO54788 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DffbO54788 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DffbO54788 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DffbO54788 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DffbO54788 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
DffbO54788 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
DffbO54788 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DffbO54788 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DffbO54788 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DffbO54788 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms