Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.47■□□□□ 0.71
Per1O35973 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Per1O35973 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.47■□□□□ 0.71
Per1O35973 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.47■□□□□ 0.71
Per1O35973 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.47■□□□□ 0.71
Per1O35973 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Per1O35973 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Per1O35973 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Per1O35973 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Per1O35973 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Per1O35973 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Per1O35973 Idnk-204ENSMUST00000226010 1898 ntBASIC19.46■□□□□ 0.71
Per1O35973 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Per1O35973 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Per1O35973 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.46■□□□□ 0.71
Per1O35973 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Per1O35973 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Per1O35973 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Per1O35973 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Per1O35973 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Per1O35973 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Per1O35973 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Per1O35973 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Per1O35973 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Per1O35973 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Per1O35973 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.45■□□□□ 0.7
Per1O35973 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Per1O35973 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Per1O35973 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Per1O35973 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Per1O35973 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Per1O35973 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Per1O35973 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Per1O35973 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.44■□□□□ 0.7
Per1O35973 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Per1O35973 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.44■□□□□ 0.7
Per1O35973 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Per1O35973 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Per1O35973 Odf3b-204ENSMUST00000227834 930 ntBASIC19.44■□□□□ 0.7
Per1O35973 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Per1O35973 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Per1O35973 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Per1O35973 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Per1O35973 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.44■□□□□ 0.7
Per1O35973 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Per1O35973 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Per1O35973 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Per1O35973 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.43■□□□□ 0.7
Per1O35973 Gm10517-202ENSMUST00000192970 758 ntBASIC19.43■□□□□ 0.7
Per1O35973 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Per1O35973 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Per1O35973 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Per1O35973 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Per1O35973 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Per1O35973 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Per1O35973 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Per1O35973 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Per1O35973 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Per1O35973 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.42■□□□□ 0.7
Per1O35973 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Per1O35973 Gm4974-201ENSMUST00000209974 875 ntBASIC19.42■□□□□ 0.7
Per1O35973 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Per1O35973 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Per1O35973 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Per1O35973 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Per1O35973 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Per1O35973 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Per1O35973 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Per1O35973 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Per1O35973 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Per1O35973 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Per1O35973 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Per1O35973 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Per1O35973 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Per1O35973 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.41■□□□□ 0.7
Per1O35973 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Per1O35973 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Per1O35973 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Per1O35973 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Per1O35973 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Per1O35973 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Per1O35973 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Per1O35973 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Per1O35973 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Per1O35973 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Per1O35973 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Per1O35973 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per1O35973 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per1O35973 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per1O35973 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per1O35973 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per1O35973 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.4■□□□□ 0.7
Per1O35973 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.4■□□□□ 0.7
Per1O35973 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Per1O35973 Gm37055-201ENSMUST00000191866 133 ntBASIC19.4■□□□□ 0.7
Per1O35973 Timm23-208ENSMUST00000226683 750 ntBASIC19.4■□□□□ 0.7
Per1O35973 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Per1O35973 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per1O35973 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per1O35973 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms