Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Phox2bO35690 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Phox2bO35690 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Phox2bO35690 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Phox2bO35690 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Phox2bO35690 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Phox2bO35690 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Phox2bO35690 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Phox2bO35690 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Phox2bO35690 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.87■□□□□ 0.45
Phox2bO35690 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Phox2bO35690 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Phox2bO35690 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Phox2bO35690 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Phox2bO35690 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Phox2bO35690 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.87■□□□□ 0.45
Phox2bO35690 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.87■□□□□ 0.45
Phox2bO35690 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Phox2bO35690 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Phox2bO35690 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Phox2bO35690 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Phox2bO35690 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Phox2bO35690 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Phox2bO35690 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Phox2bO35690 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Phox2bO35690 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Phox2bO35690 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Phox2bO35690 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.86■□□□□ 0.45
Phox2bO35690 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.86■□□□□ 0.45
Phox2bO35690 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Phox2bO35690 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Phox2bO35690 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Phox2bO35690 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.86■□□□□ 0.45
Phox2bO35690 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Phox2bO35690 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Phox2bO35690 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Phox2bO35690 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Phox2bO35690 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Phox2bO35690 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.85■□□□□ 0.45
Phox2bO35690 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Phox2bO35690 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Phox2bO35690 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.85■□□□□ 0.45
Phox2bO35690 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.85■□□□□ 0.45
Phox2bO35690 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Phox2bO35690 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Phox2bO35690 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Phox2bO35690 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.85■□□□□ 0.45
Phox2bO35690 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Phox2bO35690 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Phox2bO35690 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Phox2bO35690 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Phox2bO35690 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Phox2bO35690 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Phox2bO35690 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Phox2bO35690 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Phox2bO35690 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.84■□□□□ 0.45
Phox2bO35690 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Phox2bO35690 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Phox2bO35690 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Phox2bO35690 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.84■□□□□ 0.45
Phox2bO35690 Gm10138-203ENSMUST00000206952 366 ntBASIC17.84■□□□□ 0.45
Phox2bO35690 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Phox2bO35690 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Phox2bO35690 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Phox2bO35690 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Phox2bO35690 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Phox2bO35690 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Phox2bO35690 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Phox2bO35690 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.83■□□□□ 0.45
Phox2bO35690 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Phox2bO35690 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Phox2bO35690 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Phox2bO35690 Gm15375-201ENSMUST00000119510 849 ntBASIC17.83■□□□□ 0.44
Phox2bO35690 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.83■□□□□ 0.44
Phox2bO35690 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Phox2bO35690 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.83■□□□□ 0.44
Phox2bO35690 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Phox2bO35690 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Phox2bO35690 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Phox2bO35690 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Phox2bO35690 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Phox2bO35690 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Phox2bO35690 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Phox2bO35690 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Phox2bO35690 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Phox2bO35690 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Phox2bO35690 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Phox2bO35690 Gm18958-201ENSMUST00000174258 762 ntBASIC17.82■□□□□ 0.44
Phox2bO35690 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.82■□□□□ 0.44
Phox2bO35690 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Phox2bO35690 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Phox2bO35690 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Phox2bO35690 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Phox2bO35690 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.82■□□□□ 0.44
Phox2bO35690 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Phox2bO35690 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Phox2bO35690 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Phox2bO35690 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.81■□□□□ 0.44
Phox2bO35690 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.81■□□□□ 0.44
Phox2bO35690 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms