Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11aO35305 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.28■□□□□ 0.68
Tnfrsf11aO35305 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11aO35305 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11aO35305 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11aO35305 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.28■□□□□ 0.68
Tnfrsf11aO35305 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11aO35305 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.28■□□□□ 0.68
Tnfrsf11aO35305 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11aO35305 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11aO35305 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.27■□□□□ 0.68
Tnfrsf11aO35305 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf11aO35305 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf11aO35305 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf11aO35305 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf11aO35305 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf11aO35305 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf11aO35305 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf11aO35305 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.27■□□□□ 0.68
Tnfrsf11aO35305 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf11aO35305 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Tnfrsf11aO35305 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf11aO35305 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf11aO35305 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Tnfrsf11aO35305 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf11aO35305 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Tnfrsf11aO35305 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.27■□□□□ 0.67
Tnfrsf11aO35305 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tnfrsf11aO35305 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.27■□□□□ 0.67
Tnfrsf11aO35305 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tnfrsf11aO35305 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11aO35305 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Tnfrsf11aO35305 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11aO35305 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11aO35305 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11aO35305 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11aO35305 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11aO35305 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11aO35305 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11aO35305 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Tnfrsf11aO35305 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11aO35305 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11aO35305 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.25■□□□□ 0.67
Tnfrsf11aO35305 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11aO35305 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11aO35305 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11aO35305 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.25■□□□□ 0.67
Tnfrsf11aO35305 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11aO35305 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.25■□□□□ 0.67
Tnfrsf11aO35305 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11aO35305 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf11aO35305 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf11aO35305 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Tnfrsf11aO35305 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.24■□□□□ 0.67
Tnfrsf11aO35305 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.24■□□□□ 0.67
Tnfrsf11aO35305 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf11aO35305 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf11aO35305 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf11aO35305 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf11aO35305 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf11aO35305 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf11aO35305 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.24■□□□□ 0.67
Tnfrsf11aO35305 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tnfrsf11aO35305 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tnfrsf11aO35305 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Tnfrsf11aO35305 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.23■□□□□ 0.67
Tnfrsf11aO35305 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Tnfrsf11aO35305 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Tnfrsf11aO35305 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf11aO35305 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf11aO35305 Gm5643-201ENSMUST00000117081 966 ntBASIC19.23■□□□□ 0.67
Tnfrsf11aO35305 Gm13158-201ENSMUST00000122007 736 ntBASIC19.23■□□□□ 0.67
Tnfrsf11aO35305 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.23■□□□□ 0.67
Tnfrsf11aO35305 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.23■□□□□ 0.67
Tnfrsf11aO35305 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Tnfrsf11aO35305 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.23■□□□□ 0.67
Tnfrsf11aO35305 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tnfrsf11aO35305 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf11aO35305 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf11aO35305 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf11aO35305 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Tnfrsf11aO35305 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11aO35305 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11aO35305 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11aO35305 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11aO35305 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11aO35305 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11aO35305 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.22■□□□□ 0.67
Tnfrsf11aO35305 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.22■□□□□ 0.67
Tnfrsf11aO35305 Gm10138-203ENSMUST00000206952 366 ntBASIC19.22■□□□□ 0.67
Tnfrsf11aO35305 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11aO35305 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11aO35305 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.22■□□□□ 0.67
Tnfrsf11aO35305 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11aO35305 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11aO35305 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11aO35305 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Tnfrsf11aO35305 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.21■□□□□ 0.67
Tnfrsf11aO35305 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf11aO35305 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms