Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc2O08811 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc2O08811 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc2O08811 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc2O08811 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc2O08811 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc2O08811 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc2O08811 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.3■□□□□ 0.52
Ercc2O08811 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc2O08811 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Ercc2O08811 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc2O08811 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ercc2O08811 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ercc2O08811 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc2O08811 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.3■□□□□ 0.52
Ercc2O08811 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc2O08811 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc2O08811 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ercc2O08811 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc2O08811 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ercc2O08811 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ercc2O08811 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc2O08811 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc2O08811 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc2O08811 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc2O08811 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc2O08811 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc2O08811 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.29■□□□□ 0.52
Ercc2O08811 Gm37856-201ENSMUST00000191634 999 ntBASIC18.29■□□□□ 0.52
Ercc2O08811 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.29■□□□□ 0.52
Ercc2O08811 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.29■□□□□ 0.52
Ercc2O08811 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.29■□□□□ 0.52
Ercc2O08811 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc2O08811 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc2O08811 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc2O08811 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Ercc2O08811 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.29■□□□□ 0.52
Ercc2O08811 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc2O08811 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc2O08811 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc2O08811 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc2O08811 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ercc2O08811 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc2O08811 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ercc2O08811 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc2O08811 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc2O08811 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc2O08811 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc2O08811 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Ercc2O08811 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc2O08811 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc2O08811 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc2O08811 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ercc2O08811 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc2O08811 Rarb-207ENSMUST00000225921 2756 ntBASIC18.28■□□□□ 0.52
Ercc2O08811 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc2O08811 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc2O08811 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ercc2O08811 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ercc2O08811 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ercc2O08811 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.27■□□□□ 0.52
Ercc2O08811 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ercc2O08811 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ercc2O08811 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ercc2O08811 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.27■□□□□ 0.52
Ercc2O08811 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ercc2O08811 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ercc2O08811 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Ercc2O08811 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Ercc2O08811 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Ercc2O08811 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
Ercc2O08811 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
Ercc2O08811 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ercc2O08811 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ercc2O08811 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ercc2O08811 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ercc2O08811 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ercc2O08811 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ercc2O08811 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ercc2O08811 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ercc2O08811 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ercc2O08811 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.26■□□□□ 0.51
Ercc2O08811 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ercc2O08811 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.26■□□□□ 0.51
Ercc2O08811 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ercc2O08811 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ercc2O08811 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ercc2O08811 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ercc2O08811 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
Ercc2O08811 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ercc2O08811 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.25■□□□□ 0.51
Ercc2O08811 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ercc2O08811 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ercc2O08811 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ercc2O08811 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ercc2O08811 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ercc2O08811 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.25■□□□□ 0.51
Ercc2O08811 Trmt13-210ENSMUST00000198454 880 ntBASIC18.25■□□□□ 0.51
Ercc2O08811 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ercc2O08811 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms