Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ebf3O08791 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ebf3O08791 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Ebf3O08791 Gm43799-201ENSMUST00000201845 579 ntBASIC18.54■□□□□ 0.56
Ebf3O08791 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.54■□□□□ 0.56
Ebf3O08791 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ebf3O08791 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ebf3O08791 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ebf3O08791 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Ebf3O08791 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ebf3O08791 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ebf3O08791 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.53■□□□□ 0.56
Ebf3O08791 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ebf3O08791 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ebf3O08791 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.53■□□□□ 0.56
Ebf3O08791 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.53■□□□□ 0.56
Ebf3O08791 Gm42545-201ENSMUST00000202755 922 ntBASIC18.53■□□□□ 0.56
Ebf3O08791 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.53■□□□□ 0.56
Ebf3O08791 Gm18025-201ENSMUST00000221733 862 ntBASIC18.53■□□□□ 0.56
Ebf3O08791 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ebf3O08791 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ebf3O08791 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ebf3O08791 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ebf3O08791 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Ebf3O08791 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.53■□□□□ 0.56
Ebf3O08791 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ebf3O08791 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Ebf3O08791 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ebf3O08791 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ebf3O08791 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ebf3O08791 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ebf3O08791 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Ebf3O08791 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ebf3O08791 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ebf3O08791 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ebf3O08791 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.52■□□□□ 0.56
Ebf3O08791 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ebf3O08791 Gm15375-201ENSMUST00000119510 849 ntBASIC18.52■□□□□ 0.56
Ebf3O08791 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ebf3O08791 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ebf3O08791 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ebf3O08791 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ebf3O08791 BC021767-201ENSMUST00000126387 1716 ntBASIC18.52■□□□□ 0.55
Ebf3O08791 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf3O08791 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf3O08791 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf3O08791 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.51■□□□□ 0.55
Ebf3O08791 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ebf3O08791 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf3O08791 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ebf3O08791 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf3O08791 Gm6433-201ENSMUST00000118634 875 ntBASIC18.51■□□□□ 0.55
Ebf3O08791 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf3O08791 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf3O08791 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.51■□□□□ 0.55
Ebf3O08791 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.51■□□□□ 0.55
Ebf3O08791 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf3O08791 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf3O08791 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.51■□□□□ 0.55
Ebf3O08791 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf3O08791 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.51■□□□□ 0.55
Ebf3O08791 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf3O08791 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf3O08791 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ebf3O08791 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf3O08791 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf3O08791 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf3O08791 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ebf3O08791 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.5■□□□□ 0.55
Ebf3O08791 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.5■□□□□ 0.55
Ebf3O08791 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ebf3O08791 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ebf3O08791 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ebf3O08791 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ebf3O08791 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ebf3O08791 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.5■□□□□ 0.55
Ebf3O08791 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ebf3O08791 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ebf3O08791 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ebf3O08791 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ebf3O08791 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ebf3O08791 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ebf3O08791 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ebf3O08791 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ebf3O08791 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ebf3O08791 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ebf3O08791 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.49■□□□□ 0.55
Ebf3O08791 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ebf3O08791 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ebf3O08791 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ebf3O08791 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ebf3O08791 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ebf3O08791 Gm38285-201ENSMUST00000192928 922 ntBASIC18.49■□□□□ 0.55
Ebf3O08791 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.49■□□□□ 0.55
Ebf3O08791 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.49■□□□□ 0.55
Ebf3O08791 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Ebf3O08791 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ebf3O08791 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ebf3O08791 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ebf3O08791 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms