Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tcof1O08784 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tcof1O08784 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tcof1O08784 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tcof1O08784 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Tcof1O08784 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tcof1O08784 Gm7977-201ENSMUST00000193787 748 ntBASIC20.94■□□□□ 0.94
Tcof1O08784 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.94■□□□□ 0.94
Tcof1O08784 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
Tcof1O08784 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tcof1O08784 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.94■□□□□ 0.94
Tcof1O08784 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tcof1O08784 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tcof1O08784 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tcof1O08784 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tcof1O08784 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tcof1O08784 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tcof1O08784 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tcof1O08784 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.93■□□□□ 0.94
Tcof1O08784 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tcof1O08784 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tcof1O08784 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tcof1O08784 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tcof1O08784 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Tcof1O08784 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tcof1O08784 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tcof1O08784 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tcof1O08784 Mir6349-201ENSMUST00000184059 97 ntBASIC20.92■□□□□ 0.94
Tcof1O08784 Gm43183-201ENSMUST00000200632 547 ntBASIC20.92■□□□□ 0.94
Tcof1O08784 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.92■□□□□ 0.94
Tcof1O08784 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tcof1O08784 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tcof1O08784 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
Tcof1O08784 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tcof1O08784 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tcof1O08784 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tcof1O08784 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tcof1O08784 Fst-202ENSMUST00000223640 2612 ntBASIC20.92■□□□□ 0.94
Tcof1O08784 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tcof1O08784 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tcof1O08784 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tcof1O08784 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tcof1O08784 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Tcof1O08784 Gm37292-201ENSMUST00000192062 758 ntBASIC20.91■□□□□ 0.94
Tcof1O08784 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tcof1O08784 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tcof1O08784 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tcof1O08784 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tcof1O08784 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tcof1O08784 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.9■□□□□ 0.94
Tcof1O08784 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.9■□□□□ 0.94
Tcof1O08784 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.9■□□□□ 0.94
Tcof1O08784 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.9■□□□□ 0.94
Tcof1O08784 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tcof1O08784 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Tcof1O08784 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tcof1O08784 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Tcof1O08784 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tcof1O08784 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Tcof1O08784 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tcof1O08784 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tcof1O08784 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tcof1O08784 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tcof1O08784 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.89■□□□□ 0.93
Tcof1O08784 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tcof1O08784 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.89■□□□□ 0.93
Tcof1O08784 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.89■□□□□ 0.93
Tcof1O08784 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.89■□□□□ 0.93
Tcof1O08784 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tcof1O08784 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tcof1O08784 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tcof1O08784 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Tcof1O08784 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tcof1O08784 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tcof1O08784 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tcof1O08784 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tcof1O08784 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tcof1O08784 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Tcof1O08784 Mir1199-201ENSMUST00000117015 119 ntBASIC20.88■□□□□ 0.93
Tcof1O08784 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tcof1O08784 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.88■□□□□ 0.93
Tcof1O08784 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Tcof1O08784 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tcof1O08784 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tcof1O08784 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.88■□□□□ 0.93
Tcof1O08784 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tcof1O08784 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tcof1O08784 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tcof1O08784 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tcof1O08784 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tcof1O08784 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tcof1O08784 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tcof1O08784 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tcof1O08784 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tcof1O08784 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Tcof1O08784 Gm715-201ENSMUST00000117865 831 ntBASIC20.87■□□□□ 0.93
Tcof1O08784 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Tcof1O08784 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tcof1O08784 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.87■□□□□ 0.93
Tcof1O08784 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms