Protein–RNA interactions for Protein: J3QMY9

Top6bl, Type 2 DNA topoisomerase 6 subunit B-like, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top6blJ3QMY9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Top6blJ3QMY9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Gm11643-201ENSMUST00000119578 864 ntBASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Top6blJ3QMY9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Top6blJ3QMY9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Top6blJ3QMY9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Top6blJ3QMY9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Top6blJ3QMY9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Top6blJ3QMY9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Top6blJ3QMY9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Top6blJ3QMY9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.71■□□□□ 0.59
Top6blJ3QMY9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Top6blJ3QMY9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Top6blJ3QMY9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Top6blJ3QMY9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Top6blJ3QMY9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Top6blJ3QMY9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Top6blJ3QMY9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Top6blJ3QMY9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.71■□□□□ 0.58
Top6blJ3QMY9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top6blJ3QMY9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Top6blJ3QMY9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top6blJ3QMY9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top6blJ3QMY9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Top6blJ3QMY9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.7■□□□□ 0.58
Top6blJ3QMY9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.7■□□□□ 0.58
Top6blJ3QMY9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Top6blJ3QMY9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top6blJ3QMY9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top6blJ3QMY9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top6blJ3QMY9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top6blJ3QMY9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top6blJ3QMY9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top6blJ3QMY9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top6blJ3QMY9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Top6blJ3QMY9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.7■□□□□ 0.58
Top6blJ3QMY9 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.69■□□□□ 0.58
Top6blJ3QMY9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Top6blJ3QMY9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Top6blJ3QMY9 Gm10418-201ENSMUST00000100943 576 ntBASIC18.69■□□□□ 0.58
Top6blJ3QMY9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Top6blJ3QMY9 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.69■□□□□ 0.58
Top6blJ3QMY9 Gm12382-201ENSMUST00000122005 922 ntBASIC18.69■□□□□ 0.58
Top6blJ3QMY9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Top6blJ3QMY9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Top6blJ3QMY9 Gm29791-202ENSMUST00000207888 369 ntBASIC18.69■□□□□ 0.58
Top6blJ3QMY9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Top6blJ3QMY9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Top6blJ3QMY9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.69■□□□□ 0.58
Top6blJ3QMY9 Idnk-204ENSMUST00000226010 1898 ntBASIC18.69■□□□□ 0.58
Top6blJ3QMY9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.69■□□□□ 0.58
Top6blJ3QMY9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top6blJ3QMY9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top6blJ3QMY9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top6blJ3QMY9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top6blJ3QMY9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.68■□□□□ 0.58
Top6blJ3QMY9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Top6blJ3QMY9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Top6blJ3QMY9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top6blJ3QMY9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top6blJ3QMY9 Grk6-206ENSMUST00000224995 2971 ntBASIC18.68■□□□□ 0.58
Top6blJ3QMY9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top6blJ3QMY9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top6blJ3QMY9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top6blJ3QMY9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Top6blJ3QMY9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top6blJ3QMY9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top6blJ3QMY9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Top6blJ3QMY9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top6blJ3QMY9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Top6blJ3QMY9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Top6blJ3QMY9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.67■□□□□ 0.58
Top6blJ3QMY9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top6blJ3QMY9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.67■□□□□ 0.58
Top6blJ3QMY9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Top6blJ3QMY9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Top6blJ3QMY9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms