Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm17535J3KMR8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm17535J3KMR8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm17535J3KMR8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Gm17535J3KMR8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.06■□□□□ 0.64
Gm17535J3KMR8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Gm17535J3KMR8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.05■□□□□ 0.64
Gm17535J3KMR8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.05■□□□□ 0.64
Gm17535J3KMR8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm17535J3KMR8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm17535J3KMR8 Gm13401-201ENSMUST00000117074 291 ntBASIC19.05■□□□□ 0.64
Gm17535J3KMR8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.05■□□□□ 0.64
Gm17535J3KMR8 Gm21814-202ENSMUST00000203277 873 ntBASIC19.05■□□□□ 0.64
Gm17535J3KMR8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.05■□□□□ 0.64
Gm17535J3KMR8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm17535J3KMR8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm17535J3KMR8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Gm17535J3KMR8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm17535J3KMR8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm17535J3KMR8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm17535J3KMR8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm17535J3KMR8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm17535J3KMR8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm17535J3KMR8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm17535J3KMR8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm17535J3KMR8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Gm17535J3KMR8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm17535J3KMR8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gm17535J3KMR8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm17535J3KMR8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Gm17535J3KMR8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm17535J3KMR8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Gm17535J3KMR8 Gm10517-202ENSMUST00000192970 758 ntBASIC19.03■□□□□ 0.64
Gm17535J3KMR8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm17535J3KMR8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm17535J3KMR8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gm17535J3KMR8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm17535J3KMR8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm17535J3KMR8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm17535J3KMR8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm17535J3KMR8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm17535J3KMR8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm17535J3KMR8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm17535J3KMR8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm17535J3KMR8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm17535J3KMR8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm17535J3KMR8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm17535J3KMR8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Gm17535J3KMR8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm17535J3KMR8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm17535J3KMR8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.02■□□□□ 0.64
Gm17535J3KMR8 Gm29791-202ENSMUST00000207888 369 ntBASIC19.02■□□□□ 0.64
Gm17535J3KMR8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm17535J3KMR8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Gm17535J3KMR8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Gm17535J3KMR8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Gm17535J3KMR8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Gm10418-201ENSMUST00000100943 576 ntBASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm17535J3KMR8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Gm17535J3KMR8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms