Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3tc1G3X9F6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3tc1G3X9F6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3tc1G3X9F6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3tc1G3X9F6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3tc1G3X9F6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.68■■□□□ 1.06
Sh3tc1G3X9F6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3tc1G3X9F6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Sh3tc1G3X9F6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3tc1G3X9F6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3tc1G3X9F6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3tc1G3X9F6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Sh3tc1G3X9F6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3tc1G3X9F6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Sh3tc1G3X9F6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3tc1G3X9F6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3tc1G3X9F6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3tc1G3X9F6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3tc1G3X9F6 BC021767-201ENSMUST00000126387 1716 ntBASIC21.67■■□□□ 1.06
Sh3tc1G3X9F6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3tc1G3X9F6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3tc1G3X9F6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Sh3tc1G3X9F6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3tc1G3X9F6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.67■■□□□ 1.06
Sh3tc1G3X9F6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3tc1G3X9F6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3tc1G3X9F6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3tc1G3X9F6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Sh3tc1G3X9F6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3tc1G3X9F6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3tc1G3X9F6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3tc1G3X9F6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3tc1G3X9F6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Sh3tc1G3X9F6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3tc1G3X9F6 Gm13401-201ENSMUST00000117074 291 ntBASIC21.66■■□□□ 1.06
Sh3tc1G3X9F6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3tc1G3X9F6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3tc1G3X9F6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3tc1G3X9F6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Sh3tc1G3X9F6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3tc1G3X9F6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3tc1G3X9F6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3tc1G3X9F6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3tc1G3X9F6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3tc1G3X9F6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3tc1G3X9F6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.65■■□□□ 1.06
Sh3tc1G3X9F6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3tc1G3X9F6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3tc1G3X9F6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3tc1G3X9F6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Sh3tc1G3X9F6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3tc1G3X9F6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC21.65■■□□□ 1.06
Sh3tc1G3X9F6 Gm24841-201ENSMUST00000158676 357 ntBASIC21.65■■□□□ 1.06
Sh3tc1G3X9F6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3tc1G3X9F6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Sh3tc1G3X9F6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3tc1G3X9F6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3tc1G3X9F6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3tc1G3X9F6 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.65■■□□□ 1.06
Sh3tc1G3X9F6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sh3tc1G3X9F6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Sh3tc1G3X9F6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Sh3tc1G3X9F6 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.64■■□□□ 1.06
Sh3tc1G3X9F6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sh3tc1G3X9F6 Gm14859-201ENSMUST00000117752 357 ntBASIC21.64■■□□□ 1.05
Sh3tc1G3X9F6 Gm7638-201ENSMUST00000121348 967 ntBASIC21.64■■□□□ 1.05
Sh3tc1G3X9F6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC21.64■■□□□ 1.05
Sh3tc1G3X9F6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21.64■■□□□ 1.05
Sh3tc1G3X9F6 Gm7791-201ENSMUST00000219066 539 ntBASIC21.64■■□□□ 1.05
Sh3tc1G3X9F6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Sh3tc1G3X9F6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sh3tc1G3X9F6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sh3tc1G3X9F6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sh3tc1G3X9F6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Sh3tc1G3X9F6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sh3tc1G3X9F6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3tc1G3X9F6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Sh3tc1G3X9F6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3tc1G3X9F6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.63■■□□□ 1.05
Sh3tc1G3X9F6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Sh3tc1G3X9F6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3tc1G3X9F6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3tc1G3X9F6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3tc1G3X9F6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Sh3tc1G3X9F6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3tc1G3X9F6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.63■■□□□ 1.05
Sh3tc1G3X9F6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.63■■□□□ 1.05
Sh3tc1G3X9F6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3tc1G3X9F6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3tc1G3X9F6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3tc1G3X9F6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3tc1G3X9F6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3tc1G3X9F6 Gm27741-201ENSMUST00000185060 237 ntBASIC21.62■■□□□ 1.05
Sh3tc1G3X9F6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
Sh3tc1G3X9F6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3tc1G3X9F6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3tc1G3X9F6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.62■■□□□ 1.05
Sh3tc1G3X9F6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3tc1G3X9F6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3tc1G3X9F6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms