Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna9G3X8Z7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Chrna9G3X8Z7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chrna9G3X8Z7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.26■□□□□ 0.67
Chrna9G3X8Z7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Chrna9G3X8Z7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna9G3X8Z7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.26■□□□□ 0.67
Chrna9G3X8Z7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna9G3X8Z7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna9G3X8Z7 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.26■□□□□ 0.67
Chrna9G3X8Z7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.26■□□□□ 0.67
Chrna9G3X8Z7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna9G3X8Z7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna9G3X8Z7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna9G3X8Z7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Chrna9G3X8Z7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.25■□□□□ 0.67
Chrna9G3X8Z7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna9G3X8Z7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna9G3X8Z7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna9G3X8Z7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna9G3X8Z7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna9G3X8Z7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna9G3X8Z7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna9G3X8Z7 Rab3c-203ENSMUST00000224180 967 ntBASIC19.25■□□□□ 0.67
Chrna9G3X8Z7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna9G3X8Z7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Chrna9G3X8Z7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna9G3X8Z7 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.25■□□□□ 0.67
Chrna9G3X8Z7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna9G3X8Z7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna9G3X8Z7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna9G3X8Z7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna9G3X8Z7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna9G3X8Z7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna9G3X8Z7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna9G3X8Z7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.24■□□□□ 0.67
Chrna9G3X8Z7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.24■□□□□ 0.67
Chrna9G3X8Z7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna9G3X8Z7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna9G3X8Z7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna9G3X8Z7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna9G3X8Z7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Chrna9G3X8Z7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Gm37179-201ENSMUST00000194862 823 ntBASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna9G3X8Z7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna9G3X8Z7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna9G3X8Z7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna9G3X8Z7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna9G3X8Z7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna9G3X8Z7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.22■□□□□ 0.67
Chrna9G3X8Z7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna9G3X8Z7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.22■□□□□ 0.67
Chrna9G3X8Z7 Mir5133-201ENSMUST00000174955 77 ntBASIC19.22■□□□□ 0.67
Chrna9G3X8Z7 Mir2861-201ENSMUST00000175539 82 ntBASIC19.22■□□□□ 0.67
Chrna9G3X8Z7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna9G3X8Z7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna9G3X8Z7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna9G3X8Z7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Chrna9G3X8Z7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.22■□□□□ 0.67
Chrna9G3X8Z7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.22■□□□□ 0.67
Chrna9G3X8Z7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna9G3X8Z7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna9G3X8Z7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna9G3X8Z7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna9G3X8Z7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna9G3X8Z7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna9G3X8Z7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna9G3X8Z7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna9G3X8Z7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.21■□□□□ 0.67
Chrna9G3X8Z7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.21■□□□□ 0.67
Chrna9G3X8Z7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna9G3X8Z7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna9G3X8Z7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna9G3X8Z7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna9G3X8Z7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Chrna9G3X8Z7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Chrna9G3X8Z7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.2■□□□□ 0.66
Chrna9G3X8Z7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.2■□□□□ 0.66
Chrna9G3X8Z7 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.2■□□□□ 0.66
Chrna9G3X8Z7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.2■□□□□ 0.66
Chrna9G3X8Z7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms