Protein–RNA interactions for Protein: F8VPU2

Farp1, FERM, ARHGEF and pleckstrin domain-containing protein 1, mousemouse

Predictions only

Length 1,048 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Farp1F8VPU2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Farp1F8VPU2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Farp1F8VPU2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.86■□□□□ 0.61
Farp1F8VPU2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Farp1F8VPU2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Farp1F8VPU2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Farp1F8VPU2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Farp1F8VPU2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.85■□□□□ 0.61
Farp1F8VPU2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Farp1F8VPU2 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.85■□□□□ 0.61
Farp1F8VPU2 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Farp1F8VPU2 Mtag2-201ENSMUST00000058665 714 ntBASIC18.85■□□□□ 0.61
Farp1F8VPU2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Farp1F8VPU2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Farp1F8VPU2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Farp1F8VPU2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Farp1F8VPU2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Farp1F8VPU2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Farp1F8VPU2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Farp1F8VPU2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Farp1F8VPU2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Farp1F8VPU2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Farp1F8VPU2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Farp1F8VPU2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Farp1F8VPU2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Farp1F8VPU2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Farp1F8VPU2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Farp1F8VPU2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Farp1F8VPU2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.84■□□□□ 0.61
Farp1F8VPU2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.84■□□□□ 0.61
Farp1F8VPU2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Farp1F8VPU2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Farp1F8VPU2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Farp1F8VPU2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Farp1F8VPU2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Farp1F8VPU2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Farp1F8VPU2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.83■□□□□ 0.61
Farp1F8VPU2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Farp1F8VPU2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Farp1F8VPU2 Gm13158-201ENSMUST00000122007 736 ntBASIC18.83■□□□□ 0.6
Farp1F8VPU2 Gm10653-202ENSMUST00000139570 835 ntBASIC18.83■□□□□ 0.6
Farp1F8VPU2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.83■□□□□ 0.6
Farp1F8VPU2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.83■□□□□ 0.6
Farp1F8VPU2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Farp1F8VPU2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Farp1F8VPU2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Farp1F8VPU2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Farp1F8VPU2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Farp1F8VPU2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Farp1F8VPU2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.83■□□□□ 0.6
Farp1F8VPU2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Farp1F8VPU2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Farp1F8VPU2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Farp1F8VPU2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Farp1F8VPU2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Farp1F8VPU2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Farp1F8VPU2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Farp1F8VPU2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.82■□□□□ 0.6
Farp1F8VPU2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.82■□□□□ 0.6
Farp1F8VPU2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Farp1F8VPU2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Farp1F8VPU2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Farp1F8VPU2 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.82■□□□□ 0.6
Farp1F8VPU2 Gm10138-203ENSMUST00000206952 366 ntBASIC18.82■□□□□ 0.6
Farp1F8VPU2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Farp1F8VPU2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Farp1F8VPU2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Farp1F8VPU2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Farp1F8VPU2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.81■□□□□ 0.6
Farp1F8VPU2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.81■□□□□ 0.6
Farp1F8VPU2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.81■□□□□ 0.6
Farp1F8VPU2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Farp1F8VPU2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Farp1F8VPU2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Farp1F8VPU2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Farp1F8VPU2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms