Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh9F8VPK8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdh9F8VPK8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh9F8VPK8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh9F8VPK8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh9F8VPK8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh9F8VPK8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Gm27405-201ENSMUST00000184201 112 ntBASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh9F8VPK8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdh9F8VPK8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh9F8VPK8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh9F8VPK8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh9F8VPK8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh9F8VPK8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh9F8VPK8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh9F8VPK8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdh9F8VPK8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh9F8VPK8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh9F8VPK8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdh9F8VPK8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh9F8VPK8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdh9F8VPK8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh9F8VPK8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Pcdh9F8VPK8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.29■□□□□ 0.52
Pcdh9F8VPK8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh9F8VPK8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Pcdh9F8VPK8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh9F8VPK8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh9F8VPK8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdh9F8VPK8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh9F8VPK8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh9F8VPK8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Pcdh9F8VPK8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.28■□□□□ 0.52
Pcdh9F8VPK8 Gm7291-201ENSMUST00000199147 382 ntBASIC18.28■□□□□ 0.52
Pcdh9F8VPK8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms