Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm45058-201ENSMUST00000205810 766 ntBASIC21.55■■□□□ 1.04
Ube4aE9Q735 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ube4aE9Q735 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Ube4aE9Q735 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ube4aE9Q735 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ube4aE9Q735 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ube4aE9Q735 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Ube4aE9Q735 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ube4aE9Q735 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ube4aE9Q735 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ube4aE9Q735 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ube4aE9Q735 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ube4aE9Q735 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ube4aE9Q735 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ube4aE9Q735 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ube4aE9Q735 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ube4aE9Q735 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
Ube4aE9Q735 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube4aE9Q735 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube4aE9Q735 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube4aE9Q735 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube4aE9Q735 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube4aE9Q735 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube4aE9Q735 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ube4aE9Q735 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ube4aE9Q735 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube4aE9Q735 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ube4aE9Q735 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Ube4aE9Q735 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.52■■□□□ 1.04
Ube4aE9Q735 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.52■■□□□ 1.04
Ube4aE9Q735 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ube4aE9Q735 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.52■■□□□ 1.04
Ube4aE9Q735 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ube4aE9Q735 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ube4aE9Q735 Gm2274-201ENSMUST00000184539 609 ntBASIC21.52■■□□□ 1.04
Ube4aE9Q735 Gm29791-202ENSMUST00000207888 369 ntBASIC21.52■■□□□ 1.04
Ube4aE9Q735 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ube4aE9Q735 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ube4aE9Q735 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ube4aE9Q735 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ube4aE9Q735 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Ube4aE9Q735 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ube4aE9Q735 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Ube4aE9Q735 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Ube4aE9Q735 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
Ube4aE9Q735 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ube4aE9Q735 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ube4aE9Q735 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ube4aE9Q735 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.51■■□□□ 1.03
Ube4aE9Q735 Gm24841-201ENSMUST00000158676 357 ntBASIC21.51■■□□□ 1.03
Ube4aE9Q735 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ube4aE9Q735 Gm18032-201ENSMUST00000222541 538 ntBASIC21.51■■□□□ 1.03
Ube4aE9Q735 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ube4aE9Q735 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ube4aE9Q735 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ube4aE9Q735 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ube4aE9Q735 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ube4aE9Q735 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ube4aE9Q735 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ube4aE9Q735 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ube4aE9Q735 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC21.5■■□□□ 1.03
Ube4aE9Q735 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.5■■□□□ 1.03
Ube4aE9Q735 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ube4aE9Q735 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ube4aE9Q735 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ube4aE9Q735 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.5■■□□□ 1.03
Ube4aE9Q735 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ube4aE9Q735 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ube4aE9Q735 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ube4aE9Q735 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.49■■□□□ 1.03
Ube4aE9Q735 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.49■■□□□ 1.03
Ube4aE9Q735 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ube4aE9Q735 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ube4aE9Q735 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.49■■□□□ 1.03
Ube4aE9Q735 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ube4aE9Q735 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ube4aE9Q735 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ube4aE9Q735 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ube4aE9Q735 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ube4aE9Q735 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ube4aE9Q735 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ube4aE9Q735 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ube4aE9Q735 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.48■■□□□ 1.03
Ube4aE9Q735 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.48■■□□□ 1.03
Ube4aE9Q735 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ube4aE9Q735 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ube4aE9Q735 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Ube4aE9Q735 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ube4aE9Q735 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ube4aE9Q735 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ube4aE9Q735 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ube4aE9Q735 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ube4aE9Q735 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
Ube4aE9Q735 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ube4aE9Q735 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ube4aE9Q735 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ube4aE9Q735 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ube4aE9Q735 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Ube4aE9Q735 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ube4aE9Q735 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms